CATH Domain: 1ogoX02 XML data for domain: 1ogoX02

Molscript image for 1ogoX02
1ogoX02
PDB coordinates for domain 1ogoX02

PDB 1ogo, Chain X, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.160 3 Solenoid
2.160.20 Pectate Lyase C-like
2.160.20.10 Single-stranded right-handed beta-helix, Pectin lyase-like Gene3D
2.160.20.10.4
2.160.20.10.4.1
2.160.20.10.4.1.1
2.160.20.10.4.1.1.1
2.160.20.10.4.1.1.1.1

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Segment boundaries for domain 1ogoX02

Chopping figure for domain 1ogoX02
DomainStart PDB ResidueStop PDB Residue
1ogoX01 4 206
1ogoX02 208 574

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.160.20.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hg8A00 75.66 Gibberella fujikuroiPolygalacturonase 2.160.20.10 349 11 80 3.98 4.95
1rmgA00 74.93 Rhamnogalacturonase AAspergillus aculeatus 2.160.20.10 422 10 70 3.47 4.90
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ogoX02
PHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQN
FYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQ
VGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIK
SETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIP
AASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ogoX02
PHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQN
FYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQ
VGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIK
SETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIP
AASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:30

Cut based on decision in database "DomChop" on "cathdb"