Domain assigned by auto on 19 Aug 2007 14:25
Assigning to "2.160.20.60" based on similarity with "1llwA04"
CATH Domain: 1ofdA04
1ofdA04
PDB 1ofd, Chain A, Domain 4
| CATH Code | Level Description | Links |
|---|---|---|
 2
| Mainly Beta | |
 2.160
| 3 Solenoid | |
 2.160.20
| Pectate Lyase C-like | |
 2.160.20.60
| Gene3D | |
 2.160.20.60.1
| ||
 2.160.20.60.1.1
| ||
 2.160.20.60.1.1.1
| ||
 2.160.20.60.1.1.1.1
| ||
 2.160.20.60.1.1.1.1.1
|
Segment boundaries for domain 1ofdA04
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1ofdA01 | 1 | 421 |
| 1ofdA01 | 525 | 533 |
| 1ofdA02 | 422 | 470 |
| 1ofdA02 | 482 | 524 |
| 1ofdA02 | 534 | 786 |
| 1ofdA03 | 471 | 481 |
| 1ofdA03 | 787 | 1244 |
| 1ofdA04 | 1245 | 1507 |
Structural Neighbourhood (0 entries)
Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.
Domain ATOM Sequence
>pdb|1ofdA04 PVLDDDILADPDIQEAINHQTTATKTYRLVNTDRTVGTRLSGAIAKKYGNNGFEGNITLNFQGAAGQSFGAFNLDGMTLH LQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGNTCLYGATGGNLYANGRAGERFAVRNSVGKAVIEGAGDHCCEY MTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANW SDYLGKFWQAVPPSEKDSPEANN
Domain COMBS Sequence
>pdb|1ofdA04 PVLDDDILADPDIQEAINHQTTATKTYRLVNTDRTVGTRLSGAIAKKYGNNGFEGNITLNFQGAAGQSFGAFNLDGMTLH LQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGNTCLYGATGGNLYANGRAGERFAVRNSVGKAVIEGAGDHCCEY MTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANW SDYLGKFWQAVPPSEKDSPEANNDVSLTGEKTLTSV
Domain History Events (6)
Flow stage update by auto on 19 Aug 2007 14:14
No in_process hits for Domain "1ofdA04" ready to be processed
Flow stage update by auto on 19 Aug 2007 14:14
NW result present for Domain "1ofdA04"
Flow stage update by auto on 16 Aug 2007 17:15
All required files are present for Domain "1ofdA04"
Flow stage update by auto on 16 Aug 2007 00:02
Beginning processing for Domain "1ofdA04"
Insertion by auto on 15 Aug 2007 19:10
Final ChopClose added based on similarity with "1llwA"
