CATH Domain: 1odoA00 XML data for domain: 1odoA00

Molscript image for 1odoA00
1odoA00
PDB coordinates for domain 1odoA00

PDB 1odo, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.630 Cytochrome p450
1.10.630.10 Cytochrome p450 Gene3D
1.10.630.10.11
1.10.630.10.11.1
1.10.630.10.11.1.1
1.10.630.10.11.1.1.1
1.10.630.10.11.1.1.1.1

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Segment boundaries for domain 1odoA00

Chopping figure for domain 1odoA00
DomainStart PDB ResidueStop PDB Residue
1odoA00 7 407

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 1.10.630.10.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2z3tA00 84.42 Cytochrome P450Streptomyces sp. TP-A0274 1.10.630.10 385 27 93 3.32 3.54
1q5dA00 84.13 Epothilone biosynthetic processCytochrome P450 167A1Sorangium cellulosum 1.10.630.10 401 23 95 3.04 3.19
1lfkA00 84.12 Amycolatopsis orientalisCytochrome P450 165B3 1.10.630.10 375 28 91 4.02 4.37
1cptA00 83.28 Pseudomonas sp.Cytochrome P450-terp 1.10.630.10 412 20 92 3.38 3.66
1n97A00 82.07 Thermus thermophilus HB27Cytochrome P450 1.10.630.10 385 17 88 3.60 4.05
1izoA00 80.12 Bacillus subtilisLimonene and pinene degradationNaphthalene and anthracene degradationGamma-Hexachlorocyclohexane degradationCytochrome P450 152A1 1.10.630.10 411 13 89 3.17 3.53
3czhA00 79.10 Vitamin D 25-hydroxylaseHomo sapiensCytochrome P450, family 2, subfamily R 1.10.630.10 465 17 81 3.23 3.98
1tqnA00 77.53 Vitamin D 24-hydroxylase activityCell surfaceSteroid bindingSteroid hormone biosynthesisMetabolic pathways 1.10.630.10 468 17 80 3.83 4.77
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1odoA00
ALVLDPTGADHHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVEN
MFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDG
FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDRLSPEELRDTLLLMISAGYETTVNVI
DQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHED
ADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1odoA00
MATQQPALVLDPTGADHHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLAL
WVAVENMFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVP
QDRRDGFRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMI
SAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYA
AANRHPDWHEDADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQR
LPVLLHAG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:36

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"