CATH Domain: 1oc7A00 XML data for domain: 1oc7A00

Molscript image for 1oc7A00
1oc7A00
PDB coordinates for domain 1oc7A00

PDB 1oc7, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.40 7-stranded glycosidases (cellulases) Gene3D
3.20.20.40.1
3.20.20.40.1.1
3.20.20.40.1.1.1
3.20.20.40.1.1.1.1
3.20.20.40.1.1.1.1.1

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Segment boundaries for domain 1oc7A00

Chopping figure for domain 1oc7A00
DomainStart PDB ResidueStop PDB Residue
1oc7A00 87 450

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.20.20.40.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3a9bA00 91.18 Coprinopsis cinereaCellobiohydrolase 3.20.20.40 365 42 95 1.38 1.44
2bogX00 81.40 Endoglucanase [EC:3.2.1.4]Starch and sucrose metabolismThermobifida fuscaEndoglucanase E-2 3.20.20.40 280 24 75 2.71 3.59
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1oc7A00
APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQ
YAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAAST
YRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN
PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNG
TSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1oc7A00
APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQ
YAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAAST
YRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN
PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNG
TSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:18

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"