CATH Domain: 1o4xA02 XML data for domain: 1o4xA02

Molscript image for 1o4xA02
1o4xA02
PDB coordinates for domain 1o4xA02

PDB 1o4x, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.60 Homeodomain-like Gene3D
1.10.10.60.72
1.10.10.60.72.1
1.10.10.60.72.1.1
1.10.10.60.72.1.1.1
1.10.10.60.72.1.1.1.1

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Segment boundaries for domain 1o4xA02

Chopping figure for domain 1o4xA02
DomainStart PDB ResidueStop PDB Residue
1o4xA01 9 78
1o4xA02 79 162

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 1.10.10.60.72.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wjhA00 85.43 1.10.10.60 76 18 69 1.36 1.95
1bobA03 85.08 Chromatin silencing at telomereHistone acetyltransferase 1 [EC:2.3.1.48]Histone acetyltransferase type B catalytic subunitHistone acetyltransferase activityProtein binding 1.10.10.390 54 9 96 2.88 2.99
1dulA00 83.02 Protein exportBacterial secretion systemSignal recognition particle proteinGTP bindingSignal recognition particle subunit SRP54 1.10.260.30 61 5 81 3.50 4.27
1ng6A02 82.87 Hypothetical proteinBacillus subtilisUncharacterized protein yqeY 1.10.10.410 57 9 84 3.16 3.75
2k9nA02 81.94 MYB24Trichomonas vaginalis 1.10.10.60 54 7 92 3.04 3.28
1hq1A00 79.96 Protein exportBacterial secretion systemEscherichia coli O157:H7Signal recognition particle proteinSignal recognition particle subunit SRP54 1.10.260.30 76 7 69 2.84 4.07
1u84A00 78.74 Geobacillus kaustophilusHypothetical conserved protein 1.10.340.20 81 3 64 2.99 4.66
2i1qA01 77.83 DNA repair and recombination protein radAMethanococcus voltae 1.10.150.20 62 9 80 3.84 4.76
1a6qA02 76.33 Protein phosphatase 1AWnt receptor signaling pathwayProtein phosphatase 1A (formerly 2C) [EC:3.1.3.16]Positive regulation of transcription, DNA-dependentPositive regulation of I-kappaB kinase/NF-kappaB cascade 1.10.10.430 69 7 68 3.35 4.92
2dflA01 75.66 DNA repair and recombination protein radASulfolobus solfataricusDNA repair protein RadA 1.10.150.20 60 7 81 3.53 4.32
1uaaA02 74.73 ATP-dependent DNA helicase Rep [EC:3.6.1.-]ATP-dependent DNA helicase repEscherichia coli K-12 1.10.10.160 74 7 67 3.35 4.96
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1o4xA02
ESIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1o4xA02
ENLSSDSSLSSPSALNSPGIEGLSERRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQK
EKRI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"