CATH Domain: 1o2dA02 XML data for domain: 1o2dA02

Molscript image for 1o2dA02
1o2dA02
PDB coordinates for domain 1o2dA02

PDB 1o2d, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.1090 Dehydroquinate synthase-like, alpha domain
1.20.1090.10 Dehydroquinate synthase-like - alpha domain Gene3D
1.20.1090.10.4
1.20.1090.10.4.1
1.20.1090.10.4.1.1
1.20.1090.10.4.1.1.1
1.20.1090.10.4.1.1.1.1

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Segment boundaries for domain 1o2dA02

Chopping figure for domain 1o2dA02
DomainStart PDB ResidueStop PDB Residue
1o2dA01 7 179
1o2dA02 180 358

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.20.1090.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1oj7A02 83.25 Zinc ion bindingAlcohol dehydrogenase (NADP+) activityEscherichia coli K-12Alcohol dehydrogenase activity, zinc-dependentAlcohol dehydrogenase yqhD 1.20.1090.10 204 20 84 3.06 3.63
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1o2dA02
DELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAKIIHRNLPKAIEGNREARKKFVASCLAGVIAQTGTTLAHALGYPL
TTEKGIKHGKATGVLPFVEVKEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVSSEELEKWVEKGSRAKHLKNTPGTFT
PEKIRNIYREALG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1o2dA02
DELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAXKIIHRNLPKAIEGNREARKKXFVASCLAGXVIAQTGTTLAHALG
YPLTTEKGIKHGKATGXVLPFVXEVXKEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVSSEELEKWVEKGSRAKHLKN
TPGTFTPEKIRNIYREALG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"