CATH Domain: 1o2dA01 XML data for domain: 1o2dA01

Molscript image for 1o2dA01
1o2dA01
PDB coordinates for domain 1o2dA01

PDB 1o2d, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1970 Gene3D
3.40.50.1970.1
3.40.50.1970.1.1
3.40.50.1970.1.1.1
3.40.50.1970.1.1.1.1
3.40.50.1970.1.1.1.1.1

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Segment boundaries for domain 1o2dA01

Chopping figure for domain 1o2dA01
DomainStart PDB ResidueStop PDB Residue
1o2dA01 7 179
1o2dA02 180 358

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.1970.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rrmA01 88.00 Pyruvate metabolismGlyoxylate and dicarboxylate metabolismL-fucose catabolic processLactaldehyde reductaseEscherichia coli K-12 3.40.50.1970 179 27 92 2.01 2.18
1kq3A01 85.10 Thermotoga maritimaGlycerol dehydrogenase [EC:1.1.1.6]Glycerol dehydrogenaseGlycerolipid metabolismMetabolic pathways 3.40.50.1970 158 24 85 2.46 2.87
3ce9A01 84.17 Glycerol dehydrogenaseClostridium acetobutylicum 3.40.50.1970 153 20 84 2.06 2.45
1sg6A01 83.49 Pentafunctional AROM polypeptideEmericella nidulans 3.40.50.1970 179 12 83 2.15 2.57
1ujnA01 83.23 Phenylalanine, tyrosine and tryptophan biosynthesisDehydroquinate synthase3-dehydroquinate synthase [EC:4.2.3.4]Metabolic pathwaysThermus thermophilus 3.40.50.1970 161 16 83 2.02 2.42
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1o2dA01
PTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVKAVERYRNDSF
DFVVGLGGGSPDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGCTLFPVYAF
LDPRYTYSS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1o2dA01
PTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVXKAVERYRNDS
FDFVVGLGGGSPXDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGCTLXFPV
YAFLDPRYTYSXS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"