CATH Domain: 1o1zA00 XML data for domain: 1o1zA00

Molscript image for 1o1zA00
1o1zA00
PDB coordinates for domain 1o1zA00

PDB 1o1z, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.190 Phosphatidylinositol (PI) phosphodiesterase Gene3D
3.20.20.190.6
3.20.20.190.6.1
3.20.20.190.6.1.1
3.20.20.190.6.1.1.1
3.20.20.190.6.1.1.1.1

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Segment boundaries for domain 1o1zA00

Chopping figure for domain 1o1zA00
DomainStart PDB ResidueStop PDB Residue
1o1zA00 -3 222

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.20.20.190.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2otdA01 85.20 Glycerophospholipid metabolismShigella flexneriGlycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]Glycerophosphodiester phosphodiesterase 3.20.20.190 222 23 88 2.28 2.58
2oogD00 84.50 Glycerophospholipid metabolismGlycerophosphoryl diester phosphodiesteraseStaphylococcus aureus subsp. aureus str. NewmanGlycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] 3.20.20.190 262 21 83 2.78 3.33
2o55A00 83.91 3.20.20.190 247 22 87 2.56 2.91
1vkfA00 74.21 Thermotoga maritimaGlycerol uptake operon antiterminatorGlycerol uptake operon antiterminator-related protein 3.20.20.400 168 10 69 3.30 4.72
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1o1zA00
HHHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLDVKIRDATVSELKELTDG
KITTLKEVFENVSDDKIINIEIKEREAADAVLEISKKRKNLIFSSFDLDLLDEKFKGTKYGYLIDEENYGSIENFVERVE
KERPYSLHVPYQAFELEYAVEVLRSFRKKGIVIFVWTLNDPEIYRKIRREIDGVITDEVELFVKLR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1o1zA00
MGSDKIHHHHHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLDVKIRDATVS
ELKELTDGKITTLKEVFENVSDDKIINIEIKEREAADAVLEISKKRKNLIFSSFDLDLLDEKFKGTKYGYLIDEENYGSI
ENFVERVEKERPYSLHVPYQAFELEYAVEVLRSFRKKGIVIFVWTLNDPEIYRKIRREIDGVITDEVELFVKLR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"