CATH Domain: 1o1yA00 XML data for domain: 1o1yA00

Molscript image for 1o1yA00
1o1yA00
PDB coordinates for domain 1o1yA00

PDB 1o1y, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.880 Gene3D
3.40.50.880.8
3.40.50.880.8.1
3.40.50.880.8.1.1
3.40.50.880.8.1.1.1
3.40.50.880.8.1.1.1.1

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Segment boundaries for domain 1o1yA00

Chopping figure for domain 1o1yA00
DomainStart PDB ResidueStop PDB Residue
1o1yA00 -2 227

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 3.40.50.880.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1qdlB00 82.27 Anthranilate synthase component II [EC:4.1.3.27]Phenylalanine, tyrosine and tryptophan biosynthesisSulfolobus solfataricusAnthranilate synthase component IIProtein binding 3.40.50.880 195 15 82 2.44 2.94
1i7qB00 82.27 Anthranilate synthase component IISerratia marcescens 3.40.50.880 192 16 81 2.44 3.01
1a9xB02 81.00 3.40.50.880 227 16 78 3.23 4.12
1gpmA01 80.72 Purine metabolismMetabolic pathwaysGMP biosynthetic processProtein bindingEscherichia coli K-12 3.40.50.880 198 21 80 2.84 3.52
1vcnA02 80.48 Pyrimidine metabolismThermus thermophilus HB8CTP synthaseCTP synthase [EC:6.3.4.2]Metabolic pathways 3.40.50.880 227 11 80 3.83 4.78
2vdjA01 79.85 Homoserine O-succinyltransferase [EC:2.3.1.46]Sulfur metabolismCysteine and methionine metabolismBacillus cereus ATCC 10987Homoserine O-succinyltransferase 3.40.50.880 251 13 87 3.23 3.70
1ka9H00 77.85 Thermus thermophilus HB8Imidazole glycerol phosphate synthase subunit hisHProtein binding 3.40.50.880 195 14 78 3.00 3.84
1jvnA01 76.71 Histidine biosynthetic processGlutamine amidotransferase [EC:2.4.2.-]Purine nucleoside monophosphate biosynthetic processHistidine metabolismMetabolic pathways 3.40.50.880 239 13 77 3.58 4.62
2nv0A00 76.42 Vitamin B6 metabolismGlutamine amidotransferase subunit pdxTBacillus subtilisGlutamine amidotransferase [EC:2.6.-.-] 3.40.50.880 191 10 75 3.23 4.29
1t0bA00 74.96 Geobacillus kaustophilusHypothetical conserved protein 3.40.50.880 240 9 78 3.75 4.76
1l9xA00 74.91 Gamma-glutamyl hydrolaseFolate biosynthesisGamma-glutamyl hydrolase [EC:3.4.19.9]Homo sapiensGamma-glutamyl-peptidase activity 3.40.50.880 288 10 70 3.25 4.61
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1o1yA00
HHHVRVLAIRHVEIEDLGEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYGAYEEEKYPFLKYEFQLIEEILKK
EIPFLGILGSQLAKVLGASVYRGKNGEEIGWYFVEKVSDNKFFREFPDRLRVFQWHGDTFDLPRRATRVFTSEKYENQGF
VYGKAVGLQFHIEVGARTKRWIEAYKDELEKKKIDPRLLLETAEREEKVLKGLLRSLLERVES
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1o1yA00
XGSDKIHHHHHHVRVLAIRHVEIEDLGXXEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYXGAYEEEKYPFLK
YEFQLIEEILKKEIPFLGIXLGSQXLAKVLGASVYRGKNGEEIGWYFVEKVSDNKFFREFPDRLRVFQWHGDTFDLPRRA
TRVFTSEKYENQGFVYGKAVGLQFHIEVGARTXKRWIEAYKDELEKKKIDPRLLLETAEREEKVLKGLLRSLLERXVES
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"