CATH Domain: 1nznA00 XML data for domain: 1nznA00

Molscript image for 1nznA00
1nznA00
PDB coordinates for domain 1nznA00

PDB 1nzn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.40 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
1.25.40.10 Gene3D
1.25.40.10.13
1.25.40.10.13.1
1.25.40.10.13.1.1
1.25.40.10.13.1.1.1
1.25.40.10.13.1.1.1.1

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Segment boundaries for domain 1nznA00

Chopping figure for domain 1nznA00
DomainStart PDB ResidueStop PDB Residue
1nznA00 3 124

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.25.40.10.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2v5fA00 85.12 Prolyl 4-hydroxylase subunit alpha-1Homo sapiensProcollagen-proline 4-dioxygenase activityMitochondrion 1.25.40.10 97 17 74 2.36 3.18
1na3A00 84.75 1.25.40.10 86 16 71 2.84 3.96
2r5sA01 81.74 Vibrio parahaemolyticusPutative uncharacterized protein VP0806Putative thioredoxin 1.25.40.10 82 10 68 2.42 3.54
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nznA00
HEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVG
NYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAKKD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nznA00
GSHXEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL
AVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAXKKDGL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"