CATH Domain: 1nypA00 XML data for domain: 1nypA00

Molscript image for 1nypA00
1nypA00
PDB coordinates for domain 1nypA00

PDB 1nyp, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.10 Ribbon
2.10.110 Cysteine Rich Protein
2.10.110.10 Cysteine Rich Protein Gene3D
2.10.110.10.6
2.10.110.10.6.1
2.10.110.10.6.1.1
2.10.110.10.6.1.1.1
2.10.110.10.6.1.1.1.1

[top]
Segment boundaries for domain 1nypA00

Chopping figure for domain 1nypA00
DomainStart PDB ResidueStop PDB Residue
1nypA00 1 66

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.10.110.10.6.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1x6aA01 88.34 LIM domain kinase 2NucleusHomo sapiensProtein serine/threonine kinase activityMitochondrion 2.10.110.10 62 19 90 1.77 1.95
1b8tA02 87.70 Cysteine and glycine-rich protein 1Gallus gallusCysteine and glycine-rich protein 2.10.110.10 63 31 93 2.38 2.53
[1]
Displaying entries 1 to 2 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1nypA00
GSMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDV
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1nypA00
GSMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDV
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:46

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"