CATH Domain: 1ny1A00 XML data for domain: 1ny1A00

Molscript image for 1ny1A00
1ny1A00
PDB coordinates for domain 1ny1A00

PDB 1ny1, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.370 Glycoside hydrolase/deacetylase Gene3D
3.20.20.370.1
3.20.20.370.1.1
3.20.20.370.1.1.1
3.20.20.370.1.1.1.1
3.20.20.370.1.1.1.1.1

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Segment boundaries for domain 1ny1A00

Chopping figure for domain 1ny1A00
DomainStart PDB ResidueStop PDB Residue
1ny1A00 24 257

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.20.20.370.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2nlyA00 75.84 Hypothetical proteinBH1492 proteinBacillus halodurans 3.20.20.370 216 8 75 3.06 4.06
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ny1A00
VPNEPINWGFKRSVNHQPPDAGKQLNSLIEKYDAFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVTGHF
VKDQPQLIKRSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQT
VFWSVAFVDWKINNQKGKKYAYDHIKQAHPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSIDDLFEKE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ny1A00
VPNEPINWGFKRSVNHQPPDAGKQLNSLIEKYDAFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVTGHF
VKDQPQLIKRXSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQ
TVFWSVAFVDWKINNQKGKKYAYDHXIKQAHPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSIDDLXFEKEXRLPSL
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:33

HomCheck 'Assigned T' domains

Flow stage update by sillitoe on 06 Mar 2006 15:33

HomCheck 'Assigned T' domains

Insertion by auto on 05 Mar 2006 16:03

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"