CATH Domain: 1nxcA00 XML data for domain: 1nxcA00

Molscript image for 1nxcA00
1nxcA00
PDB coordinates for domain 1nxcA00

PDB 1nxc, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.50 Alpha/alpha barrel
1.50.10 Glycosyltransferase
1.50.10.50 Gene3D
1.50.10.50.1
1.50.10.50.1.1
1.50.10.50.1.1.1
1.50.10.50.1.1.1.1
1.50.10.50.1.1.1.1.1

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Segment boundaries for domain 1nxcA00

Chopping figure for domain 1nxcA00
DomainStart PDB ResidueStop PDB Residue
1nxcA00 178 644

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.50.10.50.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1x9dA00 90.57 Calcium ion bindingMembrane fractionOligosaccharide metabolic processIntegral to membraneMannosyl-oligosaccharide 1,2-alpha-mannosidase activity 1.50.10.50 451 38 94 1.58 1.67
2ri9A00 88.82 Penicillium citrinumMannosyl-oligosaccharide alpha-1,2-mannosidase 1.50.10.50 475 32 92 1.57 1.71
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nxcA00
FLPPVGVENREPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGMKT
EFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGR
NWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSF
YEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQ
HYLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEAL
ESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPILR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nxcA00
FLPPVGVENREPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGMKT
EFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGR
NWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSF
YEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQ
HYLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEAL
ESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPILREQKKEIDGKEK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:29

Cut based on decision in database "DomChop" on "cathdb"