CATH Domain: 1nvmA01 XML data for domain: 1nvmA01

Molscript image for 1nvmA01
1nvmA01
PDB coordinates for domain 1nvmA01

PDB 1nvm, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.17
3.20.20.70.17.1
3.20.20.70.17.1.1
3.20.20.70.17.1.1.1
3.20.20.70.17.1.1.1.1

Segment boundaries for domain 1nvmA01

Chopping figure for domain 1nvmA01
DomainStart PDB ResidueStop PDB Residue
1nvmA01 2 271
1nvmA02 278 341

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 3.20.20.70.17.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rqbA01 84.02 Propionibacterium freudenreichii subsp. shermaniiMethylmalonyl-CoA carboxyltransferase 5S subunit 3.20.20.70 268 16 91 2.57 2.81
2qf7A04 82.88 Pyruvate carboxylase subunit A [EC:6.4.1.1]Citrate cycle (TCA cycle)Rhizobium etli CFN 42Pyruvate carboxylase subunit B [EC:6.4.1.1]Pyruvate metabolism 3.20.20.70 297 15 85 3.23 3.79
3hq1B01 80.36 Pyruvate metabolismValine, leucine and isoleucine biosynthesisMetabolic pathways2-isopropylmalate synthase [EC:2.3.3.13]2-isopropylmalate synthase 3.20.20.70 338 13 75 3.16 4.19
1ub3A00 78.56 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 13 71 2.89 4.04
1vcvA00 77.51 Pyrobaculum aerophilumProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 226 11 71 3.23 4.52
3ctlA00 76.95 [EC:5.1.3.-]D-allulose-6-phosphate 3-epimeraseAllulose 6-phosphate 3-epimerase activityProtein bindingEscherichia coli K-12 3.20.20.70 219 12 73 3.57 4.84
2fliC00 76.62 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 8 75 3.23 4.30
1q6oB00 76.30 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 12 75 3.37 4.44
1sflB00 76.17 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathways3-dehydroquinate dehydratase I [EC:4.2.1.10]Staphylococcus aureus subsp. aureus MW23-dehydroquinate dehydratase 3.20.20.70 233 8 80 3.87 4.79
1nsjA00 75.05 Thermotoga maritimaN-(5'-phosphoribosyl)anthranilate isomerasePhenylalanine, tyrosine and tryptophan biosynthesisPhosphoribosylanthranilate isomerase [EC:5.3.1.24]Metabolic pathways 3.20.20.70 205 9 72 3.32 4.57
Displaying entries 1 to 10 (page 1 of 1)


Domain ATOM Sequence

>pdb|1nvmA01
TFNPSKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEIS
HAQIATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESY
GATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEV
FIAVAERLGWNHGTDLYTLMDAADDIVRPL    

Domain COMBS Sequence

>pdb|1nvmA01
MTFNPSKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEI
SHAQIATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMES
YGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLE
VFIAVAERLGWNHGTDLYTLMDAADDIVRPL    

Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 17:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"