Domain assigned by auto on 19 Aug 2007 06:24
Assigning to "3.40.50.1240" based on similarity with "1dkpA01"
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1nt4A01 | 1 | 21 |
| 1nt4A01 | 49 | 132 |
| 1nt4A01 | 253 | 391 |
| 1nt4A02 | 22 | 48 |
| 1nt4A02 | 133 | 252 |
There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.1240.8.1.1.1.1 (SIMAX score < 5)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
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1qfxA02 | 80.69 | 3.40.50.1240 | 258 | 15 | 75 | 3.04 | 4.00 | |
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1nd6A00 | 78.23 | 3.40.50.1240 | 342 | 18 | 60 | 2.47 | 4.10 |
>pdb|1nt4A01 QTVPEGYQLQQVLMMSRANLRLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAF PGCDIPVHHQEKMGTMDPTFNPVITTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQL HDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLN EAVK
Assigning to "3.40.50.1240" based on similarity with "1dkpA01"
No in_process hits for Domain "1nt4A01" ready to be processed
NW result present for Domain "1nt4A01"
All required files are present for Domain "1nt4A01"
Beginning processing for Domain "1nt4A01"
nice chopping