CATH Domain: 1nriA00 XML data for domain: 1nriA00

Molscript image for 1nriA00
1nriA00
PDB coordinates for domain 1nriA00

PDB 1nri, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.10490 Glucose-6-phosphate isomerase like protein; domain 1 Gene3D
3.40.50.10490.9
3.40.50.10490.9.1
3.40.50.10490.9.1.1
3.40.50.10490.9.1.1.1
3.40.50.10490.9.1.1.1.1

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Segment boundaries for domain 1nriA00

Chopping figure for domain 1nriA00
DomainStart PDB ResidueStop PDB Residue
1nriA00 9 256

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.10490.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3i0zA02 76.28 Sugar isomerase domain protein AgaSTagatose-6-phosphate ketose/aldose isomerase [EC:5.-.-.-]Streptococcus pneumoniae 3.40.50.10490 175 8 70 3.29 4.70
1moqA02 74.15 Amino sugar and nucleotide sugar metabolismMetabolic pathwaysAlanine, aspartate and glutamate metabolismGlucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]UDP-N-acetylglucosamine biosynthetic process 3.40.50.10490 148 10 58 2.79 4.78
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nriA00
LSTLITEQRNPNSVDIDRQSTLEIVRLNEEDKLVPLAIESCLPQISLAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASE
CPPTFGVSTEVKGIIAGGECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISI
ASNPKSEAEIADIAIETIVGPEILTGSSRLKSGTAQKVLNLTTASILLGKCYENLVDVQASNEKLKARAVRIVQATDCNK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nriA00
SNAMNDIILKSLSTLITEQRNPNSVDIDRQSTLEIVRLXNEEDKLVPLAIESCLPQISLAVEQIVQAFQQGGRLIYIGAG
TSGRLGVLDASECPPTFGVSTEXVKGIIAGGECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGL
QYAKSLGALTISIASNPKSEXAEIADIAIETIVGPEILTGSSRLKSGTAQKXVLNXLTTASXILLGKCYENLXVDVQASN
EKLKARAVRIVXQATDCNK
BLAST against CATH

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Domain History Events (4)

Flow stage update by cuff on 25 Apr 2006 18:50

COMMENT: Sarah - Scores are quite good FINAL: Lesley - Yes, merge. Very good scores. Chopping looks fine. Move 1940 into 10940.

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:45

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"