CATH Domain: 1nr0A02 XML data for domain: 1nr0A02

Molscript image for 1nr0A02
1nr0A02
PDB coordinates for domain 1nr0A02

PDB 1nr0, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.11
2.130.10.10.11.1
2.130.10.10.11.1.1
2.130.10.10.11.1.1.1
2.130.10.10.11.1.1.1.1

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Segment boundaries for domain 1nr0A02

Chopping figure for domain 1nr0A02
DomainStart PDB ResidueStop PDB Residue
1nr0A01 2 11
1nr0A01 324 611
1nr0A02 12 323

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 2.130.10.10.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pguB02 89.44 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 323 32 94 1.63 1.73
1l0qA01 83.35 Methanosarcina mazeiORF492 2.130.10.10 295 16 86 2.28 2.62
1nr0A01 82.73 Caenorhabditis elegansOvipositionLocomotionPositive regulation of locomotionNematode larval development 2.130.10.10 298 12 89 2.76 3.08
1erjC00 82.37 General transcriptional repressor activityTranscriptional repressor complexGlucose repression regulatory protein TUP1Negative regulation of transcriptionSaccharomyces cerevisiae 2.130.10.10 357 13 78 2.41 3.05
1p22A02 82.23 Ubiquitin-dependent protein catabolic processF-box/WD repeat-containing protein 1AHomo sapiensProtein bindingSignal transduction 2.130.10.10 295 18 86 2.82 3.25
1nexB02 80.03 Cell division control protein 4F-box and WD-40 domain protein CDC4Ubiquitin mediated proteolysisProtein bindingG2/M transition of mitotic cell cycle 2.130.10.10 338 16 82 3.29 3.99
1ri6A00 78.93 Pentose phosphate pathwayMetabolic pathways6-phosphogluconolactonase [EC:3.1.1.31]6-phosphogluconolactonase activity6-phosphogluconolactonase 2.130.10.10 333 10 86 3.57 4.13
1pguB01 78.31 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 279 15 83 3.12 3.73
1jofA00 76.36 Neurospora crassaCarboxy-cis,cis-muconate cyclase 2.130.10.10 355 8 80 3.98 4.97
1npeA00 76.17 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 7 75 3.78 4.98
1sqjB01 73.85 Oligoxyloglucan reducing end-specific cellobiohydrolaseGeotrichum sp. M128 2.130.10.140 322 5 87 3.61 4.14
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nr0A02
SLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT
THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT
VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG
TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nr0A02
SLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT
THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT
VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG
TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:22

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"