CATH Domain: 1nr0A01 XML data for domain: 1nr0A01

Molscript image for 1nr0A01
1nr0A01
PDB coordinates for domain 1nr0A01

PDB 1nr0, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.14
2.130.10.10.14.1
2.130.10.10.14.1.1
2.130.10.10.14.1.1.1
2.130.10.10.14.1.1.1.1

Segment boundaries for domain 1nr0A01

Chopping figure for domain 1nr0A01
DomainStart PDB ResidueStop PDB Residue
1nr0A01 2 11
1nr0A01 324 611
1nr0A02 12 323

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 2.130.10.10.14.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pguB01 86.63 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 279 28 88 2.06 2.32
1p22A02 83.84 Ubiquitin-dependent protein catabolic processF-box/WD repeat-containing protein 1AHomo sapiensProtein bindingSignal transduction 2.130.10.10 295 14 90 2.04 2.25
1erjC00 83.63 General transcriptional repressor activityTranscriptional repressor complexGlucose repression regulatory protein TUP1Negative regulation of transcriptionSaccharomyces cerevisiae 2.130.10.10 357 16 79 2.20 2.78
1l0qA01 82.66 Methanosarcina mazeiORF492 2.130.10.10 295 16 88 2.95 3.33
1pguB02 80.54 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 323 13 88 4.03 4.57
1nexB02 79.06 Cell division control protein 4F-box and WD-40 domain protein CDC4Ubiquitin mediated proteolysisProtein bindingG2/M transition of mitotic cell cycle 2.130.10.10 338 14 81 4.05 4.98
1rwiA00 77.61 Serine/threonine protein kinase, bacterial [EC:2.7.11.1]Serine/threonine-protein kinase pknDMycobacterium tuberculosis 2.120.10.30 256 12 78 3.77 4.78
1jofA00 76.96 Neurospora crassaCarboxy-cis,cis-muconate cyclase 2.130.10.10 355 7 75 2.88 3.83
2p4oA01 76.71 Nostoc sp. PCC 7120All0351 protein 2.120.10.30 285 13 78 3.77 4.82
1ijqA01 76.17 Low-density lipoprotein particle clearanceIntestinal cholesterol absorptionVery-low-density lipoprotein receptor activityProtein O-linked glycosylationLow-density lipoprotein receptor 2.120.10.30 254 8 78 3.86 4.89
1sqjB01 74.75 Oligoxyloglucan reducing end-specific cellobiohydrolaseGeotrichum sp. M128 2.130.10.140 322 10 88 4.38 4.95
1xipA00 74.25 Nup82 complexStructural molecule activityMRNA export from nucleusProtein bindingNucleoporin NUP159 2.130.10.10 364 6 77 3.81 4.92
2vdrA00 73.61 Integrin alpha 2BIdentical protein bindingPathways in cancerHematopoietic cell lineageDilated cardiomyopathy 2.130.10.130 452 9 63 2.91 4.58
Displaying entries 1 to 13 (page 1 of 1)


Domain ATOM Sequence

>pdb|1nr0A01
SEFSQTALFPNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVV
PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVH
VYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT
GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVPF    

Domain COMBS Sequence

>pdb|1nr0A01
MSEFSQTALFPNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV
VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV
HVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA
TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVPF    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:22

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"