CATH Domain: 1npsA00 XML data for domain: 1npsA00

Molscript image for 1npsA00
1npsA00
PDB coordinates for domain 1npsA00

PDB 1nps, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.20 Gamma-B Crystallin; domain 1
2.60.20.10 Crystallins Gene3D
2.60.20.10.8
2.60.20.10.8.1
2.60.20.10.8.1.1
2.60.20.10.8.1.1.1
2.60.20.10.8.1.1.1.1

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Segment boundaries for domain 1npsA00

Chopping figure for domain 1npsA00
DomainStart PDB ResidueStop PDB Residue
1npsA00 1 88

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.60.20.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hdfA00 89.33 Spherulin-3APhysarum polycephalum 2.60.20.10 99 27 83 1.43 1.71
1g6eA00 80.08 Streptomyces tendaeAntifungal protein 2.60.20.30 87 10 81 3.92 4.80
1wktA00 80.02 Killer toxin HM-1Williopsis saturnus var. mrakii 2.60.20.20 87 11 82 3.27 3.95
1c01A00 79.66 Macadamia integrifoliaAntimicrobial peptide 1 2.60.20.30 76 15 83 3.19 3.80
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1npsA00
ANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVSS
IRVISVPV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1npsA00
ANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVSS
IRVISVPV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:34

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:57

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"