CATH Domain: 1nofA01 XML data for domain: 1nofA01

Molscript image for 1nofA01
1nofA01
PDB coordinates for domain 1nofA01

PDB 1nof, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1180 Golgi alpha-mannosidase II Gene3D
2.60.40.1180.6
2.60.40.1180.6.1
2.60.40.1180.6.1.1
2.60.40.1180.6.1.1.1
2.60.40.1180.6.1.1.1.1

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Segment boundaries for domain 1nofA01

Chopping figure for domain 1nofA01
DomainStart PDB ResidueStop PDB Residue
1nofA01 31 44
1nofA01 321 413
1nofA02 45 320

Structural Neighbourhood (21 entries)

There are 21 matching structural neighberhood comparisons for CATH ID 2.60.40.1180.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 21 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3clwC01 87.60 Bacteroides fragilis NCTC 9343Conserved hypothetical exported protein 2.60.40.1180 100 25 86 2.32 2.67
2nt0A02 83.39 GlucosylceramidaseProtein bindingSphingolipid metabolismGlucosylceramidase [EC:3.2.1.45]Metabolic pathways 2.60.40.1180 109 12 70 2.03 2.87
1ji1A03 80.89 Neopullulanase 1Thermoactinomyces vulgaris 2.60.40.1180 90 7 81 3.63 4.46
1wzlA04 80.83 Neopullulanase 2Thermoactinomyces vulgaris 2.60.40.1180 83 12 76 2.31 3.01
1m7xA03 80.63 Starch and sucrose metabolismMetabolic pathways1,4-alpha-glucan branching enzyme [EC:2.4.1.18]Glycogen biosynthetic process1,4-alpha-glucan-branching enzyme 2.60.40.1180 106 15 85 2.95 3.47
1e43A03 80.21 Alpha-amylaseBacillus amyloliquefaciens 2.60.40.1180 87 6 77 2.60 3.35
2bs9A01 79.58 Geobacillus stearothermophilusBeta-xylosidase 2.60.40.1500 136 10 72 2.57 3.53
1bf2A03 79.54 Pseudomonas amyloderamosaIsoamylase 2.60.40.1180 114 13 80 3.85 4.77
3hg3B02 78.91 Galactose metabolismAlpha-galactosidase AExtracellular regionGlycosphingolipid catabolic processGlycosphingolipid biosynthesis - globo series 2.60.40.1180 101 4 72 3.32 4.55
1ua7A02 78.38 Starch and sucrose metabolismBacillus subtilisAlpha-amylaseAlpha-amylase [EC:3.2.1.1]Metabolic pathways 2.60.40.1180 78 15 70 2.49 3.55
1ea9C04 78.24 Bacillus sp.Cyclomaltodextrinase 2.60.40.1180 81 11 75 2.73 3.61
3edfA03 78.00 CyclomaltodextrinaseFlavobacterium sp. 92 2.60.40.1180 80 16 69 2.92 4.22
1uokA03 77.40 Bacillus cereusOligo-1,6-glucosidase 2.60.40.1180 78 12 69 2.88 4.16
1zjaA03 77.22 Pseudomonas mesoacidophilaSucrose isomerase 2.60.40.1180 78 15 71 3.10 4.31
1g5aA04 76.61 AmylosucraseNeisseria polysaccharea 2.60.40.1180 74 12 69 3.21 4.64
3cc1A02 76.58 BH1870 proteinBacillus halodurans 2.60.40.1180 84 5 67 3.16 4.70
1j0hA04 76.54 NeopullulanaseGeobacillus stearothermophilus 2.60.40.1180 83 10 73 3.54 4.79
1iv8A05 75.98 Sulfolobus acidocaldariusGlycosyltrehalose-producing enzyme 2.60.40.1180 66 10 60 2.54 4.18
1uasA02 75.75 Alpha-galactosidaseOryza sativa Japonica Group 2.60.40.1180 88 5 68 3.27 4.79
1ktbA02 75.30 Alpha-N-acetylgalactosaminidaseGallus gallus 2.60.40.1180 91 5 74 3.40 4.55
1lwjA03 73.95 4-alpha-glucanotransferase [EC:2.4.1.25]Thermotoga maritimaStarch and sucrose metabolism4-alpha-glucanotransferaseMetabolic pathways 2.60.40.1180 50 10 46 2.00 4.28
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Displaying entries 1 to 21 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nofA01
DTVKIDANVNYQIIGALRIQATENPQSNVHLTAYKNTDGKMVIVAVNTNDSDQMLSLNISNANVTKFEKYSTSASLNVEY
GGSSQVDSSGKATVWLNPLSVTTFVSK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nofA01
DTVKIDANVNYQIIGALRIQATENPQSNVHLTAYKNTDGKMVIVAVNTNDSDQMLSLNISNANVTKFEKYSTSASLNVEY
GGSSQVDSSGKATVWLNPLSVTTFVSK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:29

Cut based on decision in database "DomChop" on "cathdb"