CATH Domain: 1no4C00 XML data for domain: 1no4C00

Molscript image for 1no4C00
1no4C00
PDB coordinates for domain 1no4C00

PDB 1no4, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.5 Single alpha-helices involved in coiled-coils or other helix-helix interfaces
1.20.5.400 Gene3D
1.20.5.400.1
1.20.5.400.1.1
1.20.5.400.1.1.1
1.20.5.400.1.1.1.1
1.20.5.400.1.1.1.1.1

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Segment boundaries for domain 1no4C00

Chopping figure for domain 1no4C00
DomainStart PDB ResidueStop PDB Residue
1no4C00 2 74

Structural Neighbourhood (28 entries)

There are 28 matching structural neighberhood comparisons for CATH ID 1.20.5.400.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 28 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2w83C00 90.29 Homo sapiensIntegral to membraneC-Jun-amino-terminal kinase-interacting protein 4SpermatogenesisPositive regulation of cell migration 1.20.5.1000 67 11 76 0.59 0.77
3gwoA00 84.84 Human immunodeficiency virus type 1 lw12.3 isolateEnvelope glycoprotein gp160 1.10.287.210 53 9 69 2.00 2.86
2b9bA04 84.75 Simian virus 5 (strain W3)Fusion glycoprotein F0 1.20.5.1070 62 16 72 2.17 2.99
1gmjD00 83.50 Negative regulation of hydrolase activityProtein homodimerization activityATPase inhibitor activityBos taurusCalmodulin binding 1.20.5.500 56 7 76 3.40 4.43
1ybkA00 83.08 TetrabrachionStaphylothermus marinus 1.20.5.1060 52 9 60 1.50 2.49
1ik7A00 82.27 Regulation of proteolysisProtein domain specific bindingHemocyte proliferationPlasma membraneZygotic specification of dorsal/ventral axis 1.20.5.530 52 11 71 2.73 3.83
1jekA00 82.02 Visna/maedi virus EV1 KV1772Envelope glycoprotein gp160 1.20.5.440 40 10 54 1.16 2.12
1ifpA00 80.52 Pseudomonas phage Pf3Capsid protein G8P 1.20.5.440 44 6 60 1.35 2.24
1jm0A00 79.21 1.20.5.420 48 6 53 2.17 4.06
1kilE00 78.88 Complexin-1Syntaxin-1 bindingRattus norvegicusDendriteSynaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex 1.20.5.580 41 2 56 2.61 4.65
1hf9A00 78.49 Protein homodimerization activityNegative regulation of hydrolase activityATPase inhibitor activityBos taurusATPase binding 1.20.5.500 41 14 56 1.83 3.26
1d7mA00 77.80 Cortexillin-1Response to bacteriumProtein homodimerization activityActin filament bundle assemblyActin filament network formation 1.20.5.1050 101 9 47 1.24 2.61
2o1kA00 77.70 Simian rotavirus A/SA11-bothNon-structural glycoprotein 4 1.20.5.430 42 16 57 2.68 4.66
1kv4A00 77.16 Moricin-1Bombyx mori 1.20.5.750 42 7 50 1.90 3.75
2rklB00 76.98 Multivesicular bodyVacuolar protein sorting-associated protein VTA1Membrane fractionProtein bindingEndocytosis 1.20.5.420 50 8 52 2.27 4.36
1a2xB00 76.83 Troponin I, fast skeletal muscleTroponin T bindingOryctolagus cuniculus 1.20.5.420 31 9 42 1.02 2.40
1ohhG00 76.09 Bos taurusATP synthase subunit gamma, mitochondrialProtein binding 1.10.287.80 94 6 52 2.14 4.11
2jdiH02 75.91 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]Huntington's diseaseOxidative phosphorylationParkinson's diseaseBos taurus 1.20.5.440 42 14 54 2.28 4.16
1u57A00 75.59 Human immunodeficiency virus type 1 lw12.3 isolateGag polyprotein 1.20.5.760 48 4 61 2.62 4.25
1deeG00 75.04 Staphylococcus aureus subsp. aureus NCTC 8325Immunoglobulin G-binding protein A 1.20.5.420 51 11 52 2.59 4.98
2k9yA00 73.66 ApoptosisIntegral to plasma membraneEphrin type-A receptor 2Homo sapiensEph receptor A2 [EC:2.7.10.1] 1.20.5.510 41 7 53 2.67 5.00
1omiA02 73.16 Listeria monocytogenesListeriolysin regulatory protein 1.20.5.460 27 14 36 0.99 2.68
2qjyC01 72.24 Oxidative phosphorylationMetabolic pathwaysRhodobacter sphaeroidesUbiquinol-cytochrome c reductase iron-sulfur subunitUbiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2] 1.20.5.510 33 3 45 2.02 4.47
2r44A01 70.41 Cytophaga hutchinsonii ATCC 33406MoxR-like ATPase [EC:3.6.3.-]Putative uncharacterized protein 1.20.5.420 26 11 35 1.13 3.17
1vf5C03 66.93 Mastigocladus laminosusApocytochrome f 1.20.5.700 32 3 27 0.64 2.34
3c8vA04 66.34 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 1.20.5.510 19 0 26 0.60 2.31
2qiwA02 60.51 Corynebacterium glutamicumPEP phosphonomutase and related enzymes 1.20.5.510 18 5 24 1.21 4.91
1mkmA02 55.81 Thermotoga maritimaTranscriptional regulator, IclR family 1.20.5.640 14 35 19 0.69 3.60
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Displaying entries 1 to 28 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1no4C00
PLKPEEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGLT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1no4C00
PLKPEEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGLT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:39

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"