CATH Domain: 1nnlA01 XML data for domain: 1nnlA01

Molscript image for 1nnlA01
1nnlA01
PDB coordinates for domain 1nnlA01

PDB 1nnl, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1000 Gene3D
3.40.50.1000.9
3.40.50.1000.9.1
3.40.50.1000.9.1.1
3.40.50.1000.9.1.1.1
3.40.50.1000.9.1.1.1.1

Segment boundaries for domain 1nnlA01

Chopping figure for domain 1nnlA01
DomainStart PDB ResidueStop PDB Residue
1nnlA01 5 29
1nnlA01 81 134
1nnlA01 147 221
1nnlA02 30 80
1nnlA02 135 146

Structural Neighbourhood (40 entries)

There are 40 matching structural neighberhood comparisons for CATH ID 3.40.50.1000.9.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 40 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l7mB01 87.26 Phosphoserine phosphatase [EC:3.1.3.3]Methanocaldococcus jannaschiiPhosphoserine phosphataseGlycine, serine and threonine metabolismMetabolic pathways 3.40.50.1000 147 25 85 2.86 3.36
1wpgA04 85.66 Calcium ion bindingATP catabolic processER-Golgi intermediate compartmentCalcium-transporting ATPase activitySarcoplasmic/endoplasmic reticulum calcium ATPase 1 3.40.50.1000 156 16 80 2.12 2.65
2hi0A01 85.21 Putative phosphoglycolate phosphatasePhosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842Metabolic pathwaysGlyoxylate and dicarboxylate metabolism 3.40.50.1000 146 14 88 2.55 2.89
2nyvA01 84.95 Phosphoglycolate phosphatase [EC:3.1.3.18]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysAquifex aeolicusPhosphoglycolate phosphatase 3.40.50.1000 151 12 88 2.56 2.90
3d6jA01 84.65 Phosphoglycolate phosphatase [EC:3.1.3.18]Putative haloacid dehalogenase-like hydrolaseBacteroides fragilis NCTC 9343Glyoxylate and dicarboxylate metabolismMetabolic pathways 3.40.50.1000 137 14 87 2.59 2.98
2hszA01 84.57 Phosphoglycolate phosphatase [EC:3.1.3.18]Haemophilus somnus 129PTMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase 3.40.50.1000 148 16 87 2.35 2.68
3fvvA01 84.39 Bordetella pertussisPutative uncharacterized protein 3.40.50.1000 148 12 83 2.67 3.19
2ah5A01 83.90 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysPhosphoglycolate phosphatase [EC:3.1.3.18]Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 142 17 85 2.49 2.91
2fdrA01 83.58 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1000 150 16 87 2.80 3.19
2fi1A01 83.51 Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 123 18 74 2.06 2.78
2hdoA01 83.09 Phosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus plantarumMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase (Putative) 3.40.50.1000 134 17 83 2.57 3.07
2oycA01 82.83 Vitamin B6 metabolismPyridoxal phosphate phosphataseHomo sapiensPyridoxal phosphatase [EC:3.1.3.74]Metabolic pathways 3.40.50.1000 167 17 81 2.39 2.93
2hcfA01 82.73 Chlorobaculum tepidumHydrolase, haloacid dehalogenase-like family 3.40.50.1000 156 19 87 2.51 2.88
1k1eD00 82.71 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]Haemophilus influenzaeLipopolysaccharide biosynthesisMetabolic pathways 3.40.50.1000 170 15 79 2.58 3.25
3dnpA01 82.45 Stress response protein yhaXBacillus subtilis 3.40.50.1000 144 10 81 3.26 4.02
1zjjB01 82.43 4-nitrophenyl phosphatase [EC:3.1.3.41]Pyrococcus horikoshiiGamma-Hexachlorocyclohexane degradationPutative uncharacterized protein PH1952 3.40.50.1000 146 17 83 2.39 2.88
3ed5A01 82.39 Putative HAD-hydrolase yfnBBacillus subtilis2-haloacid dehalogenase [EC:3.8.1.2]1,2-Dichloroethane degradationGamma-Hexachlorocyclohexane degradation 3.40.50.1000 140 17 81 2.78 3.42
1nf2A01 81.77 Thermotoga maritimaPutative uncharacterized protein 3.40.50.1000 161 16 85 3.32 3.87
2hx1A01 81.59 Cytophaga hutchinsonii ATCC 33406Possible sugar phosphatase, HAD superfamily 3.40.50.1000 155 11 85 3.21 3.74
1rlmA01 81.53 Sugar phosphatase supHSugar-phosphatase [EC:3.1.3.23]Escherichia coli K-12 3.40.50.1000 162 14 83 3.47 4.16
3e58B01 81.45 Streptococcus thermophilus LMG 18311Beta-phosphoglucomutase, putative 3.40.50.1000 136 12 82 2.99 3.63
1te2A01 81.43 Fructose and mannose metabolismMetabolic pathwaysRiboflavin metabolismThiamine metabolismMetal ion binding 3.40.50.1000 141 17 85 3.04 3.55
2ho4B01 81.33 Mus musculusHaloacid dehalogenase-like hydrolase domain-containing protein 2 3.40.50.1000 159 13 86 3.40 3.92
3dv9A01 81.14 Bacteroides vulgatus ATCC 8482Putative beta-phosphoglucomutase 3.40.50.1000 160 11 83 3.17 3.79
2qltA01 81.06 Response to osmotic stressNucleusProtein bindingMetabolic pathwaysCytoplasm 3.40.50.1000 171 12 80 2.71 3.38
1swvA01 81.00 Bacillus cereusPhosphonoacetaldehyde hydrolase 3.40.50.1000 178 15 77 3.43 4.42
1u7pD00 80.82 Mus musculusMagnesium-dependent phosphatase 1 3.40.50.1000 161 14 77 2.83 3.67
3bwvA01 80.66 Putative 5'(3')-deoxyribonucleotidaseStaphylococcus epidermidis ATCC 12228 3.40.50.1000 121 9 71 2.48 3.47
1rkuA01 80.61 Glycine, serine and threonine metabolismMetabolic pathwaysPhosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]Pseudomonas aeruginosaHomoserine kinase 3.40.50.1000 111 20 62 1.89 3.00
2p11A01 80.58 Burkholderia xenovorans LB400Putative uncharacterized protein 3.40.50.1000 140 11 78 3.19 4.06
3b8cA03 80.41 Oxidative phosphorylationArabidopsis thalianaPlasma membraneATPase 2, plasma membrane-typeProtein binding 3.40.50.1000 163 18 79 2.92 3.69
1u02A01 80.34 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.40.50.1000 149 18 83 3.78 4.55
2i7dA01 80.23 Pyrimidine metabolism5'(3')-deoxyribonucleotidase, cytosolic typePurine metabolismDephosphorylationNucleus 3.40.50.1000 138 14 78 3.24 4.12
2b0cA01 79.85 Phosphatase yihXGlucose-1-phosphatase activityPutative hydrolase of the HAD superfamilyEscherichia coli K-12 3.40.50.1000 133 14 79 3.07 3.84
2pr7A00 79.70 Corynebacterium glutamicumHaloacid dehalogenase/epoxide hydrolase family 3.40.50.1000 131 7 76 3.23 4.22
1ltqA02 78.55 Polynucleotide kinaseEnterobacteria phage T4 3.40.50.1000 136 13 75 3.77 4.96
3i28A01 78.43 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1000 135 9 77 3.49 4.48
2i6xA01 75.47 Hydrolase, haloacid dehalogenase-like familyPutative hydrolase of the HAD superfamilyPorphyromonas gingivalis 3.40.50.1000 127 9 73 3.14 4.28
1f0kA01 74.89 Peptidoglycan biosynthesisMetabolic pathwaysUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity 3.40.50.2000 175 6 67 3.09 4.58
3cnhA01 74.68 Hydrolase family proteinPutative hydrolase of the HAD superfamilyDeinococcus radiodurans 3.40.50.1000 114 9 70 3.24 4.58
Displaying entries 1 to 40 (page 1 of 1)


Domain ATOM Sequence

>pdb|1nnlA01
SELRKLFYSADAVCFDVDSTVIREEAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRD
ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLG    

Domain COMBS Sequence

>pdb|1nnlA01
MISHSELRKLFYSADAVCFDVDSTVIREEAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVF
ANRDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL
EE    

Domain History Events (4)

Domain assigned by lewis on 09 Jan 2007 13:16

Assigning domain 1nnlA01 to 3.40.50.1000 (as agreed with the CATH update team) after the chain has been rechopped. The reason is that the domain is very similar to the old domain 1nnlA01 (from the previous chopping at "Sun Mar 5 17:22:07 2006") which was in 3.40.50.1000 at the time the chain was unchopped.

Flow stage update by auto on 07 Jan 2007 19:31

All required files are present for Domain "1nnlA01"

Flow stage update by auto on 07 Jan 2007 11:42

Beginning processing for Domain "1nnlA01"

Insertion by auto on 07 Jan 2007 11:31

Final ChopClose added based on similarity with "1l8lA"