CATH Domain: 1nni100 XML data for domain: 1nni100

Molscript image for 1nni100
1nni100
PDB coordinates for domain 1nni100

PDB 1nni, Chain 1, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.360 Gene3D
3.40.50.360.14
3.40.50.360.14.1
3.40.50.360.14.1.1
3.40.50.360.14.1.1.3
3.40.50.360.14.1.1.3.1

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Segment boundaries for domain 1nni100

Chopping figure for domain 1nni100
DomainStart PDB ResidueStop PDB Residue
1nni100 2 171

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 3.40.50.360.14.1.1.3.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e5dA01 84.75 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.40.50.360 143 11 81 2.20 2.69
3d7nA00 84.37 Agrobacterium tumefaciens str. C58Flavodoxin, WrbA-like protein 3.40.50.360 153 15 84 2.41 2.85
2fzvA00 83.85 Shigella flexneriPutative arsenical resistance proteinArsenical resistance protein ArsH 3.40.50.360 235 24 69 1.76 2.52
2ohhA02 83.83 Type A flavoprotein fprAMethanothermobacter marburgensis str. Marburg 3.40.50.360 144 18 80 2.33 2.90
2arkA00 82.91 FlavodoxinAquifex aeolicus 3.40.50.360 180 19 75 2.33 3.11
1vmeA02 81.52 Thermotoga maritimaPutative uncharacterized protein 3.40.50.360 144 13 78 2.90 3.71
5nulA00 80.19 Clostridium beijerinckiiFlavodoxin 3.40.50.360 138 17 77 2.66 3.43
1bvyF00 79.49 Bacillus megateriumBifunctional P-450/NADPH-P450 reductase 3.40.50.360 152 10 82 3.34 4.06
1w25B02 76.01 Two-component systemCell cycle - CaulobacterCaulobacter vibrioidesIdentical protein bindingTwo-component system, cell cycle response regulator 3.40.50.2300 143 9 66 3.27 4.89
3a9sA01 75.20 D-arabinose isomeraseGeobacillus pallidus 3.40.50.1070 179 9 78 3.88 4.96
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nni100
NLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSPEYHSGSGALK
NALDFLSSEQFKYKPVALLAVAGGGKGGINALNNRTVRGVYANVIPKQLVLDPVHIDVENATVAENIKESIKELVEELSF
AKAGN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nni100
XNXLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSPEYHSGXSG
ALKNALDFLSSEQFKYKPVALLAVAGGGKGGINALNNXRTVXRGVYANVIPKQLVLDPVHIDVENATVAENIKESIKELV
EELSXFAKAGNPGV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:38

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"