CATH Domain: 1nnhA00 XML data for domain: 1nnhA00

Molscript image for 1nnhA00
1nnhA00
PDB coordinates for domain 1nnhA00

PDB 1nnh, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.930 BirA Bifunctional Protein; domain 2
3.30.930.10 Bira Bifunctional Protein; Domain 2 Gene3D
3.30.930.10.2
3.30.930.10.2.1
3.30.930.10.2.1.1
3.30.930.10.2.1.1.1
3.30.930.10.2.1.1.1.1

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Segment boundaries for domain 1nnhA00

Chopping figure for domain 1nnhA00
DomainStart PDB ResidueStop PDB Residue
1nnhA00 2 294

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.30.930.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1x54A02 84.79 Aminoacyl-tRNA biosynthesisAsparaginyl-tRNA synthetasePyrococcus horikoshiiAsparaginyl-tRNA synthetase [EC:6.1.1.22] 3.30.930.10 330 23 85 2.16 2.54
1b8aA02 83.50 Aminoacyl-tRNA biosynthesisThermococcus kodakarensisAspartyl-tRNA synthetase [EC:6.1.1.12]Aspartyl-tRNA synthetase 3.30.930.10 333 24 83 2.30 2.75
1l0wA02 83.48 Aminoacyl-tRNA biosynthesisAspartyl-tRNA synthetase [EC:6.1.1.12]Thermus thermophilusAspartyl-tRNA synthetase 3.30.930.10 306 21 82 3.73 4.53
3e9hA02 82.47 Geobacillus stearothermophilusLysyl-tRNA synthetase 3.30.930.10 340 18 80 2.87 3.57
12asA00 79.89 Nitrogen metabolismCyanoamino acid metabolismAlanine, aspartate and glutamate metabolismMetabolic pathwaysAspartate--ammonia ligase 3.30.930.10 327 14 84 3.00 3.57
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1nnhA00
NAVEIISREISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEIYGVKMRLTHSMILHKQ
LAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAKMEDIMRLIERLVYGLFRKAEEWTGREFPKTKRFEVF
EYSEVLEEFGSDEKASQEMEEPFWIINIPREFYDREVDGFWRNYDLILPYGYGEVASGGEREWEYEKIVAKIRKAGLNED
SFRPYLEIAKAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRIPGIPAVI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1nnhA00
MNAVEIISREISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEIYGVKMRLTHSMILHK
QLAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAKMEDIMRLIERLVYGLFRKAEEWTGREFPKTKRFEV
FEYSEVLEEFGSDEKASQEMEEPFWIINIPREFYDREVDGFWRNYDLILPYGYGEVASGGEREWEYEKIVAKIRKAGLNE
DSFRPYLEIAKAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRIPGIPAVI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:32

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"