CATH Domain: 1nn3A00 XML data for domain: 1nn3A00

Molscript image for 1nn3A00
1nn3A00
PDB coordinates for domain 1nn3A00

PDB 1nn3, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.300 P-loop containing nucleotide triphosphate hydrolases Gene3D
3.40.50.300.10
3.40.50.300.10.1
3.40.50.300.10.1.1
3.40.50.300.10.1.1.1
3.40.50.300.10.1.1.1.1

Segment boundaries for domain 1nn3A00

Chopping figure for domain 1nn3A00
DomainStart PDB ResidueStop PDB Residue
1nn3A00 4 212

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 3.40.50.300.10.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2wwfA00 92.42 Pyrimidine metabolismMetabolic pathwaysPlasmodium falciparum 3D7Thymidylate kinase, putativeDTMP kinase [EC:2.7.4.9] 3.40.50.300 211 37 97 1.57 1.62
1gtvA00 86.02 Pyrimidine metabolismMetabolic pathwaysThymidylate kinaseDTMP kinase [EC:2.7.4.9]Mycobacterium tuberculosis 3.40.50.300 208 23 88 2.34 2.63
4tmkA00 85.84 Pyrimidine metabolismMetabolic pathwaysDTTP biosynthetic processNucleobase, nucleoside and nucleotide interconversionEscherichia coli K-12 3.40.50.300 210 26 93 2.62 2.79
2no7B00 81.14 Pyrimidine metabolismPurine metabolismPyrimidine nucleotide metabolic processDeoxycitidine kinase [EC:2.7.1.74]Homo sapiens 3.40.50.300 219 14 86 3.90 4.50
2c95A00 80.34 Adenylate kinase isoenzyme 1Purine metabolismNucleusProtein bindingMetabolic pathways 3.40.50.300 195 12 82 3.82 4.64
3dl0A00 80.26 Bacillus subtilisPurine metabolismAdenylate kinaseAdenylate kinase [EC:2.7.4.3]Metabolic pathways 3.40.50.300 212 13 75 3.14 4.16
1qf9A00 79.77 Pyrimidine base salvagePyrimidine metabolismPhosphotransferase activity, phosphate group as acceptorCDP biosynthetic processMetabolic pathways 3.40.50.300 194 11 80 3.64 4.50
2vp4D00 79.69 Deoxynucleoside kinase activityDeoxynucleoside kinaseNucleoside diphosphate phosphorylation[EC:2.7.1.145]Drosophila melanogaster 3.40.50.300 199 11 81 3.83 4.71
1khtB00 79.15 Adenylate kinaseMethanococcus voltae 3.40.50.300 191 12 84 3.43 4.07
1knqA00 79.02 Pentose phosphate pathwayMetabolic pathwaysThermoresistant gluconokinaseGluconokinase activityGluconokinase [EC:2.7.1.12] 3.40.50.300 171 12 77 3.34 4.31
1y63A00 77.38 Leishmania majorPutative uncharacterized protein 3.40.50.300 168 9 77 3.48 4.49
1lw7A02 77.20 Haemophilus influenzaeTranscriptional regulator nadRHipB family transcriptional regulator, involved in the regulation of NAD biosynthesis 3.40.50.300 156 9 72 3.21 4.41
2qt1A00 77.13 Nicotinamide riboside kinase 1Homo sapiens 3.40.50.300 174 11 73 3.65 4.99
1zp6A00 76.70 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.300 174 11 77 3.84 4.95
2grjA00 75.81 Thermotoga maritimaDephospho-CoA kinase [EC:2.7.1.24]Pantothenate and CoA biosynthesisDephospho-CoA kinaseMetabolic pathways 3.40.50.300 175 13 73 3.45 4.71
Displaying entries 1 to 15 (page 1 of 1)


Domain ATOM Sequence

>pdb|1nn3A00
RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLI
KEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRC
FHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELWK    

Domain COMBS Sequence

>pdb|1nn3A00
GSHMAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRW
EQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQ
ERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELWK    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:36

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"