CATH Domain: 1njgA02 XML data for domain: 1njgA02

Molscript image for 1njgA02
1njgA02
PDB coordinates for domain 1njgA02

PDB 1njg, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.8 Helicase, Ruva Protein; domain 3
1.10.8.60 Gene3D
1.10.8.60.15
1.10.8.60.15.1
1.10.8.60.15.1.1
1.10.8.60.15.1.1.1
1.10.8.60.15.1.1.1.1

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Segment boundaries for domain 1njgA02

Chopping figure for domain 1njgA02
DomainStart PDB ResidueStop PDB Residue
1njgA01 4 177
1njgA02 178 243

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 1.10.8.60.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sxjE02 89.86 Leading strand elongationNucleotide excision repairDNA replicationReplication factor C subunit 3/5Sister chromatid cohesion 1.10.8.60 64 20 95 1.77 1.85
1jr3D03 89.15 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 1.10.8.60 71 12 91 1.93 2.11
1sxjD02 88.11 DNA replicationNucleotide excision repairLeading strand elongationCell cycle checkpointProtein binding 1.10.8.60 70 18 92 2.18 2.35
1sxjC02 88.09 Nucleotide excision repairDNA replicationLeading strand elongationReplication factor C subunit 3Replication factor C subunit 3/5 1.10.8.60 69 21 94 2.05 2.18
2z4sA02 86.18 Thermotoga maritimaTwo-component systemChromosomal replication initiator proteinChromosomal replication initiator protein dnaA 1.10.8.60 72 16 90 2.81 3.11
1jqjD03 85.08 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 1.10.8.60 86 12 75 1.90 2.51
2zc2A00 79.77 DNA replication proteinStreptococcus mutansPutative uncharacterized protein 1.10.10.630 74 9 79 3.91 4.90
1okkD01 79.53 Cell division protein ftsYThermus aquaticusProtein binding 1.20.120.140 58 5 66 2.79 4.18
1tgrA00 79.44 Positive regulation of smooth muscle cell proliferationPositive regulation of DNA replicationPositive regulation of gene-specific transcriptionRegulation of multicellular organism growthPositive regulation of tyrosine phosphorylation of Stat5 protein 1.10.100.10 52 7 72 3.50 4.81
1no1A00 78.73 39 proteinBacillus phage SPP1 1.10.8.200 65 10 84 3.93 4.63
1l8qA02 76.64 Two-component systemChromosomal replication initiator proteinChromosomal replication initiator protein dnaAAquifex aeolicus 1.10.8.60 49 12 68 2.27 3.33
1j09A04 76.10 Aminoacyl-tRNA biosynthesisThermus thermophilus HB8Porphyrin and chlorophyll metabolismGlutamyl-tRNA synthetase [EC:6.1.1.17]Glutamyl-tRNA synthetase 1.10.8.70 48 8 65 2.74 4.21
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1njgA02
LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1njgA02
LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:26

Assigning to "1.10.8.60" based on similarity with "1njfA02"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "1njgA02" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "1njgA02"

Flow stage update by auto on 28 Nov 2006 18:21

All required files are present for Domain "1njgA02"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "1njgA02"

Insertion by cuff on 20 Nov 2006 19:16

easy batch of chopping