CATH Domain: 1ngrA00 XML data for domain: 1ngrA00

Molscript image for 1ngrA00
1ngrA00
PDB coordinates for domain 1ngrA00

PDB 1ngr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.533 Death Domain, Fas
1.10.533.10 Death Domain, Fas Gene3D
1.10.533.10.12
1.10.533.10.12.1
1.10.533.10.12.1.1
1.10.533.10.12.1.1.1
1.10.533.10.12.1.1.1.1

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Segment boundaries for domain 1ngrA00

Chopping figure for domain 1ngrA00
DomainStart PDB ResidueStop PDB Residue
1ngrA00 334 418

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.533.10.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a1wA00 77.51 FAS (TNFRSF6)-associated via death domainIdentical protein bindingPathways in cancerChagas diseaseAlzheimer's disease 1.10.533.10 83 12 88 3.78 4.28
1ddfA00 75.68 Type I diabetes mellitusPathways in cancerSoluble fractionChagas diseaseAutoimmune thyroid disease 1.10.533.10 127 12 63 2.95 4.63
1n3kA00 74.81 Astrocytic phosphoprotein PEA-15Cricetulus griseus 1.10.533.10 130 9 56 2.58 4.53
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ngrA00
GNLYSSLPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEACPVRALLASWGAQDSATLDALLAALRRIQRADIVE
SLCSE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ngrA00
GNLYSSLPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEACPVRALLASWGAQDSATLDALLAALRRIQRADIVE
SLCSE
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1ngr000" to "1ngrA00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:34

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"