CATH Domain: 1ne9A02 XML data for domain: 1ne9A02

Molscript image for 1ne9A02
1ne9A02
PDB coordinates for domain 1ne9A02

PDB 1ne9, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.630 Aminopeptidase
3.40.630.30 Gene3D
3.40.630.30.13
3.40.630.30.13.1
3.40.630.30.13.1.1
3.40.630.30.13.1.1.1
3.40.630.30.13.1.1.1.2

Segment boundaries for domain 1ne9A02

Chopping figure for domain 1ne9A02
DomainStart PDB ResidueStop PDB Residue
1ne9A01 1 143
1ne9A01 315 335
1ne9A02 148 312

Structural Neighbourhood (38 entries)

There are 38 matching structural neighberhood comparisons for CATH ID 3.40.630.30.13.1.1.1.2 (SIMAX score < 5)

Displaying entries 1 to 38 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lrzA02 82.91 Peptidoglycan biosynthesisMetabolic pathwaysPeptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.-]Aminoacyltransferase femAStaphylococcus aureus 3.40.630.30 195 21 76 2.47 3.21
2hqyA02 81.45 Hypothetical proteinBacteroides thetaiotaomicronPutative uncharacterized protein 3.40.630.30 164 9 89 2.82 3.14
2fe7A00 80.93 Pseudomonas aeruginosaProbable N-acetyltransferase 3.40.630.30 154 7 76 3.00 3.93
1s3zA00 80.65 Salmonella enterica subsp. enterica serovar EnteritidisAminoglycoside 6'-N-acetyltransferase 3.40.630.30 147 7 75 2.53 3.34
1tiqB00 80.14 Bacillus subtilisProtease synthase and sporulation negative regulatory protein PAI 1 3.40.630.30 161 8 75 3.01 4.01
2r7hB00 79.84 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 3.40.630.30 157 5 79 3.61 4.55
3k9uA00 79.59 Putative uncharacterized protein Ta0374Thermoplasma acidophilum 3.40.630.30 159 6 78 3.06 3.88
1q2yA00 79.54 Bacillus subtilisUncharacterized N-acetyltransferase yjcF 3.40.630.30 140 7 72 2.82 3.91
1qsmD00 79.52 CytoplasmIdentical protein bindingSaccharomyces cerevisiaeHistone acetyltransferase activityHistone acetyltransferase HPA2 3.40.630.30 152 9 79 3.04 3.83
3efaA00 78.91 Tyrosine metabolismBenzoate degradation via CoA ligationLactobacillus plantarumAcetyltransferase (Putative)Limonene and pinene degradation 3.40.630.30 141 7 71 2.82 3.94
2r1iA01 78.81 Arthrobacter sp. FB24GCN5-related N-acetyltransferase 3.40.630.30 129 5 73 2.79 3.80
2fiaA00 78.56 Acetyltransferase, GNAT familyEnterococcus faecalis 3.40.630.30 157 8 74 3.40 4.56
2hv2A03 78.42 Enterococcus faecalisPutative uncharacterized protein 3.40.630.30 148 8 83 3.98 4.76
2q7bA00 78.18 Acetyltransferase, GNAT familyStreptococcus agalactiae serogroup V 3.40.630.30 161 6 78 3.37 4.28
2dxqA00 78.14 Agrobacterium tumefaciens str. C58Acetyltransferase 3.40.630.30 145 11 75 3.56 4.74
3g8wA00 78.10 Staphylococcus epidermidis ATCC 12228Lactococcal prophage ps3 protein 05 3.40.630.30 158 12 75 3.32 4.38
2i79D00 78.06 Acetyltransferase, GNAT familyStreptococcus pneumoniae 3.40.630.30 167 5 76 3.00 3.91
1xebA00 78.01 Pseudomonas aeruginosaElaA proteinPutative uncharacterized protein 3.40.630.30 146 10 72 2.64 3.66
3exnA00 77.98 Tyrosine metabolismLimonene and pinene degradation1- and 2-Methylnaphthalene degradationPhenylalanine metabolismBenzoate degradation via CoA ligation 3.40.630.30 151 3 78 3.46 4.43
2ozgA01 77.84 Anabaena variabilis ATCC 29413GCN5-related N-acetyltransferase 3.40.630.30 117 10 67 2.62 3.89
3fb3A00 77.69 Amino sugar and nucleotide sugar metabolismGlucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]N-acetyltransferase, putativeTrypanosoma brucei 3.40.630.30 141 5 72 3.08 4.24
3d8pB00 77.64 Staphylococcus aureus subsp. aureus Mu50Putative uncharacterized protein 3.40.630.30 157 8 76 3.28 4.26
2fiwA00 77.50 Putative acetyltransferase [EC:2.3.1.-]GCN5-related N-acetyltransferase:Aminotransferase, class-IIRhodopseudomonas palustris 3.40.630.30 156 4 73 3.20 4.36
3d3sA00 77.16 L-2,4-diaminobutyric acid acetyltransferaseGlycine, serine and threonine metabolismBordetella parapertussisL-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]Metabolic pathways 3.40.630.30 157 3 73 3.13 4.23
3e0kA00 76.98 Arginine and proline metabolismVibrio parahaemolyticusAmino-acid N-acetyltransferase [EC:2.3.1.1]Amino-acid acetyltransferaseMetabolic pathways 3.40.630.30 143 6 67 2.67 3.93
2pdoA01 76.95 Shigella flexneriAcetyltransferase ypeA 3.40.630.30 118 11 70 2.71 3.82
1vhsB00 76.80 Bacillus subtilisPhosphinothricin acetyltransferase [EC:2.3.1.183]Phosphonate and phosphinate metabolismPutative phosphinothricin acetyltransferase ywnH 3.40.630.30 155 5 73 2.94 3.98
2i00C01 76.77 Acetyltransferase, GNAT familyEnterococcus faecalis 3.40.630.30 144 6 69 2.68 3.85
2qecA00 76.43 Corynebacterium glutamicumGCN5-related N-acetyltransferase 3.40.630.30 175 5 67 2.73 4.05
2atrA00 75.93 Acetyltransferase, GNAT familyStreptococcus pneumoniae 3.40.630.30 127 6 67 2.93 4.32
3ey5A01 75.87 Acetyltransferase-like, GNAT familyBacteroides thetaiotaomicron 3.40.630.30 144 2 70 3.23 4.59
2ge3B00 75.79 Agrobacterium tumefaciens str. C58Probable acetyltransferase 3.40.630.30 159 7 75 3.76 4.96
1y7rA00 75.42 Staphylococcus aureus subsp. aureus Mu50Putative uncharacterized protein 3.40.630.30 125 5 68 3.21 4.69
2q0yA01 75.32 Ralstonia eutropha JMP134GCN5-related N-acetyltransferase 3.40.630.30 125 7 69 3.44 4.98
1ro5A01 75.11 Pseudomonas aeruginosaAcyl homoserine lactone synthase [EC:2.3.1.184]Acyl-homoserine-lactone synthase 3.40.630.30 187 6 65 3.19 4.89
1sqhA02 75.09 Drosophila melanogasterCG14615 3.40.630.30 128 7 73 3.38 4.57
3eo4A00 74.45 Methanocaldococcus jannaschiiUncharacterized protein MJ1062 3.40.630.30 155 3 76 3.81 4.99
2ozhA01 74.01 Xanthomonas campestris pv. campestrisPutative uncharacterized protein 3.40.630.30 120 11 68 3.41 4.98
Displaying entries 1 to 38 (page 1 of 1)


Domain ATOM Sequence

>pdb|1ne9A02
MVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADT
MRIFVAEREGKLLSTGIALKYGRKIWYMYAGSMDGNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHV
FVKDA    

Domain COMBS Sequence

>pdb|1ne9A02
MVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADT
MRIFVAEREGKLLSTGIALKYGRKIWYMYAGSMDGNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHV
FVKDA    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:20

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"