CATH Domain: 1ne9A01 XML data for domain: 1ne9A01

Molscript image for 1ne9A01
1ne9A01
PDB coordinates for domain 1ne9A01

PDB 1ne9, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.630 Aminopeptidase
3.40.630.30 Gene3D
3.40.630.30.9
3.40.630.30.9.1
3.40.630.30.9.1.1
3.40.630.30.9.1.1.1
3.40.630.30.9.1.1.1.2

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Segment boundaries for domain 1ne9A01

Chopping figure for domain 1ne9A01
DomainStart PDB ResidueStop PDB Residue
1ne9A01 1 143
1ne9A01 315 335
1ne9A02 148 312

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.630.30.9.1.1.1.2 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lrzA01 83.42 Peptidoglycan biosynthesisMetabolic pathwaysPeptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.-]Aminoacyltransferase femAStaphylococcus aureus 3.40.630.30 143 23 83 2.25 2.69
1q2yA00 75.72 Bacillus subtilisUncharacterized N-acetyltransferase yjcF 3.40.630.30 140 8 74 3.66 4.92
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ne9A01
PVLNLNDPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMD
VTDVDLLDRLVDEAVKALDGRAYVLRFDPEVAYSDEFNTTLQDHGYVTRNRNVADAGMHATIQEYIGEIDKVLDPEVYAE
LVKD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ne9A01
PVLNLNDPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMD
VTDVDLLDRLVDEAVKALDGRAYVLRFDPEVAYSDEFNTTLQDHGYVTRNRNVADAGMHATIQEYIGEIDKVLDPEVYAE
LVKD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:20

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"