CATH Domain: 1na0A00 XML data for domain: 1na0A00

Molscript image for 1na0A00
1na0A00
PDB coordinates for domain 1na0A00

PDB 1na0, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.40 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
1.25.40.10 Gene3D
1.25.40.10.4
1.25.40.10.4.1
1.25.40.10.4.1.1
1.25.40.10.4.1.1.1
1.25.40.10.4.1.1.1.1

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Segment boundaries for domain 1na0A00

Chopping figure for domain 1na0A00
DomainStart PDB ResidueStop PDB Residue
1na0A00 7 125

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 1.25.40.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2fo7A00 92.20 1.25.40.10 136 89 86 1.31 1.52
1na3A00 91.50 1.25.40.10 86 97 72 1.44 1.99
1elwA00 91.48 Response to stressPrion diseasesStress-induced-phosphoprotein 1NucleusGolgi apparatus 1.25.40.10 117 28 98 2.23 2.27
1elrA00 90.16 Prion diseasesNucleusProtein bindingStress-induced-phosphoprotein 1Response to stress 1.25.40.10 128 32 92 2.71 2.94
2v5fA00 87.62 Prolyl 4-hydroxylase subunit alpha-1Homo sapiensProcollagen-proline 4-dioxygenase activityMitochondrion 1.25.40.10 97 26 72 1.19 1.65
1p5qA02 86.22 NucleusHeat shock protein bindingProtein foldingCytoplasmFK506-binding protein 4/5 [EC:5.2.1.8] 1.25.40.10 166 31 71 1.36 1.90
1a17A00 85.80 Protein phosphatase 5 [EC:3.1.3.16]NucleusSerine/threonine-protein phosphatase 5MitosisPositive regulation of I-kappaB kinase/NF-kappaB cascade 1.25.40.10 159 26 73 1.81 2.46
2hr2A00 85.68 Chlorobaculum tepidumPutative uncharacterized protein 1.25.40.10 148 21 76 2.70 3.54
3beeA00 82.50 Vibrio parahaemolyticusPutaive YfrE protein 1.25.40.10 90 18 71 2.99 4.19
2r5sA01 81.89 Vibrio parahaemolyticusPutative uncharacterized protein VP0806Putative thioredoxin 1.25.40.10 82 10 68 2.08 3.06
1xnfA00 77.00 Lipoprotein NlpIEscherichia coli K-12Lipoprotein nlpI 1.25.40.10 256 29 46 1.95 4.23
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1na0A00
NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA
YYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1na0A00
GAMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAW
YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"