Set cath from cathlist by auto on 05 Mar 2006 18:22
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1n7oA02
1n7oA02
PDB 1n7o, Chain A, Domain 2
| CATH Code | Level Description | Links |
|---|---|---|
 1
| Mainly Alpha | |
 1.50
| Alpha/alpha barrel | |
 1.50.10
| Glycosyltransferase | |
 1.50.10.100
| Gene3D | |
 1.50.10.100.2
| ||
 1.50.10.100.2.1
| ||
 1.50.10.100.2.1.1
| ||
 1.50.10.100.2.1.1.1
| ||
 1.50.10.100.2.1.1.1.1
|
Segment boundaries for domain 1n7oA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1n7oA01 | 548 | 804 |
| 1n7oA02 | 171 | 542 |
| 1n7oA03 | 805 | 889 |
Structural Neighbourhood (2 entries)
There are 2 matching structural neighberhood comparisons for CATH ID 1.50.10.100.2.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 2 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1x1iA01 | 88.96 | 1.50.10.100 | 361 | 24 | 96 | 1.68 | 1.75 | |
|
1cb8A01 | 80.55 | 1.50.10.100 | 312 | 16 | 81 | 2.74 | 3.36 |
[1]
Displaying entries 1 to 2 (page 1 of 1)
Domain ATOM Sequence
>pdb|1n7oA02 KDTYTDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMAK QVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFVP DPEHFRKTTDNPVKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYGN VLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMSE GETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPRTS
Domain COMBS Sequence
>pdb|1n7oA02 KDTYTDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMAK QVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFVP DPEHFRKTTDNPVKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYGN VLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMSE GETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPRTS
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 18:22
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 17:19
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
