CATH Domain: 1n1tA02 XML data for domain: 1n1tA02

Molscript image for 1n1tA02
1n1tA02
PDB coordinates for domain 1n1tA02

PDB 1n1t, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.200 Gene3D
2.60.120.200.11
2.60.120.200.11.1
2.60.120.200.11.1.1
2.60.120.200.11.1.1.1
2.60.120.200.11.1.1.1.1

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Segment boundaries for domain 1n1tA02

Chopping figure for domain 1n1tA02
DomainStart PDB ResidueStop PDB Residue
1n1tA01 1 386
1n1tA02 417 618

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.60.120.200.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1w0pA01 77.54 Vibrio choleraeSialidase 2.60.120.200 177 6 74 2.99 4.00
1a8dA01 77.36 Tetanus toxinTentoxilysin [EC:3.4.24.68]Clostridium tetani 2.60.120.200 246 8 77 3.61 4.67
2w08A00 76.65 Acute-phase responseHomo sapiensChaperone-mediated protein complex assemblySerum amyloid P-componentExtracellular space 2.60.120.200 204 8 75 3.30 4.37
1bkzA00 74.04 Homo sapiensSugar bindingGalectin-7Galectin-7Extracellular space 2.60.120.200 135 8 62 3.10 4.97
2ac1A02 73.66 Galactose metabolismCell wallBeta-fructofuranosidase [EC:3.2.1.26]Metabolic pathwaysBeta-fructofuranosidase activity 2.60.120.560 192 6 73 3.66 4.96
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1n1tA02
AVPTAGLVGFLSHSANGSVWEDVYRCVDANVANAERVPNGLKFNGVGGGAVWPVARQGQTRRYQFANYRFTLVATVTIDE
LPKGTSPLLGAGLEGPGDAKLLGLSYDKNRQWRPLYGAAPASPTGSWELHKKYHVVLTMADRQGSVYVDGQPLAGSGNTV
VRGATLPDISHFYIGGPRSKGAPTDSRVTVTNVVLYNRRLNS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1n1tA02
AVPTAGLVGFLSHSANGSVWEDVYRCVDANVANAERVPNGLKFNGVGGGAVWPVARQGQTRRYQFANYRFTLVATVTIDE
LPKGTSPLLGAGLEGPGDAKLLGLSYDKNRQWRPLYGAAPASPTGSWELHKKYHVVLTMADRQGSVYVDGQPLAGSGNTV
VRGATLPDISHFYIGGPRSKGAPTDSRVTVTNVVLYNRRLNS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:17

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"