CATH Domain: 1n1tA01 XML data for domain: 1n1tA01

Molscript image for 1n1tA01
1n1tA01
PDB coordinates for domain 1n1tA01

PDB 1n1t, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.10 Gene3D
2.120.10.10.4
2.120.10.10.4.1
2.120.10.10.4.1.1
2.120.10.10.4.1.1.1
2.120.10.10.4.1.1.1.1

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Segment boundaries for domain 1n1tA01

Chopping figure for domain 1n1tA01
DomainStart PDB ResidueStop PDB Residue
1n1tA01 1 386
1n1tA02 417 618

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.120.10.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1w8oA01 82.01 Micromonospora viridifaciensSialidase 2.120.10.10 354 16 84 2.79 3.28
1w0pA02 81.97 Vibrio choleraeSialidase 2.120.10.10 377 18 85 2.93 3.42
2jkbA02 81.26 Sialidase BSialidase-1 [EC:3.2.1.18]Sphingolipid metabolismOther glycan degradationStreptococcus pneumoniae 2.120.10.10 371 16 84 2.55 3.03
1v0eD02 75.93 Enterobacteria phage K1FEndo-N-acetylneuraminidase 2.120.10.10 360 11 79 3.27 4.14
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1n1tA01
AASLAPGSSRVELFKRKNSTVPFEESNGTIRERVVHSFRIPTIVNVDGVMVAIADARYETSFDNSFIETAVKYSVDDGAT
WNTQIAIKNSRASSVSRVMDATVIVKGNKLYILVGSFNKTRNSWTQHRDGSDWEPLLVVGEVTKSAANGKTTATISWGKP
VSLKPLFPAEFDGILTKEFVGGVGAAIVASNGNLVYPVQIADMGGRVFTKIMYSEDDGNTWKFAEGRSKFGCSEPAVLEW
EGKLIINNRVDGNRRLVYESSDMGKTWVEALGTLSHVWTNSPTSNQQDCQSSFVAVTIEGKRVMLFTHPLNLKGRWMRDR
LHLWMTDNQRIFDVGQISIGDENSGYSSVLYKDDKLYSLHEINTNDVYSLVFVRLIGELQLMKSVV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1n1tA01
AASLAPGSSRVELFKRKNSTVPFEESNGTIRERVVHSFRIPTIVNVDGVMVAIADARYETSFDNSFIETAVKYSVDDGAT
WNTQIAIKNSRASSVSRVMDATVIVKGNKLYILVGSFNKTRNSWTQHRDGSDWEPLLVVGEVTKSAANGKTTATISWGKP
VSLKPLFPAEFDGILTKEFVGGVGAAIVASNGNLVYPVQIADMGGRVFTKIMYSEDDGNTWKFAEGRSKFGCSEPAVLEW
EGKLIINNRVDGNRRLVYESSDMGKTWVEALGTLSHVWTNSPTSNQQDCQSSFVAVTIEGKRVMLFTHPLNLKGRWMRDR
LHLWMTDNQRIFDVGQISIGDENSGYSSVLYKDDKLYSLHEINTNDVYSLVFVRLIGELQLMKSVV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:17

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"