CATH Domain: 1my7A00 XML data for domain: 1my7A00

Molscript image for 1my7A00
1my7A00
PDB coordinates for domain 1my7A00

PDB 1my7, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.10 Immunoglobulins Gene3D
2.60.40.10.14
2.60.40.10.14.1
2.60.40.10.14.1.1
2.60.40.10.14.1.1.1
2.60.40.10.14.1.1.1.1

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Segment boundaries for domain 1my7A00

Chopping figure for domain 1my7A00
DomainStart PDB ResidueStop PDB Residue
1my7A00 191 297

Structural Neighbourhood (43 entries)

There are 43 matching structural neighberhood comparisons for CATH ID 2.60.40.10.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 43 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1my5A00 99.10 NucleusDNA bindingTranscription factor activityAcute myeloid leukemiaProtein binding 2.60.40.10 107 99 100 0.21 0.21
1imhC02 88.60 NucleusNuclear factor of activated T-cells 5ExcretionTranscription factor activityRNA polymerase II transcription factor activity 2.60.40.10 106 22 90 1.95 2.15
1p7hL02 87.85 2.60.40.10 107 18 89 1.91 2.13
1k3iA03 83.09 Gibberella zeaeGalactose oxidase precursor 2.60.40.10 97 12 81 2.89 3.55
3bmvA03 82.20 Thermoanaerobacterium thermosulfurigenesCyclomaltodextrin glucanotransferase precursor 2.60.40.10 80 15 73 2.19 2.97
3brdA03 81.32 2.60.40.10 98 11 81 3.79 4.66
2uzyB03 80.76 Hepatocyte growth factor receptor activityBasal plasma membraneIntegral to plasma membraneHepatocyte growth factor receptor precursorHomo sapiens 2.60.40.10 87 10 73 1.69 2.29
2uzyB04 79.84 Basal plasma membraneHepatocyte growth factor receptor activityIntegral to plasma membraneHepatocyte growth factor receptor precursorHomo sapiens 2.60.40.10 79 13 72 2.14 2.94
2uzxB02 79.62 Hepatocyte growth factor receptor activityBasal plasma membraneIntegral to plasma membraneHepatocyte growth factor receptor precursorHomo sapiens 2.60.40.10 121 9 70 2.40 3.42
1edqA01 79.51 Chitinase A precursorSerratia marcescens 2.60.40.10 107 7 77 3.66 4.72
1uadC00 79.42 ExocystRattus norvegicusExocyst complex component 2 2.60.40.10 92 9 82 3.18 3.87
1uctA01 77.97 Immune responseEukaryotic plasma membrane / membrane attachedIntegral to plasma membranePlasma membraneLeucocyte 2.60.40.10 91 6 81 3.56 4.38
1jmxA03 77.85 Quinohemoprotein amine dehydrogenase 60 kDa subunitPseudomonas putida 2.60.40.10 79 10 73 2.86 3.87
1cwvA03 77.65 InvasinYersinia pseudotuberculosis 2.60.40.920 102 5 81 3.59 4.42
3b9eA01 77.59 Chitinase A precursorVibrio harveyi 2.60.40.10 110 12 76 3.79 4.96
1iarB01 77.51 Immune responseJak-STAT signaling pathwayInterleukin 4 receptorEukaryotic plasma membrane / membrane attachedIntegral to plasma membrane 2.60.40.10 96 6 85 3.59 4.22
1p53A01 76.84 Integral to plasma membraneLeukocyte transendothelial migrationNatural killer cell mediated cytotoxicityHomo sapiensIntercellular adhesion molecule 1 2.60.40.10 98 4 81 3.49 4.29
1cwvA02 76.77 InvasinYersinia pseudotuberculosis 2.60.40.920 97 7 80 3.36 4.18
2brqA00 75.98 Nervous system developmentTranscription factor bindingActin filament bindingCytoplasmPositive regulation of transcription factor import into nucleus 2.60.40.10 94 9 81 3.81 4.69
2qfpA01 75.55 Iron(III)-zinc(II) purple acid phosphatasePhaseolus vulgaris 2.60.40.380 97 9 79 3.29 4.14
1w8oA02 75.50 Micromonospora viridifaciensSialidase precursor 2.60.40.10 102 8 84 3.48 4.14
1v05A00 75.50 Filamin-CHomo sapiensProtein binding 2.60.40.10 96 7 81 3.90 4.80
1tdqA02 75.44 Nervous system developmentCell CommunicationRattus norvegicusProteinaceous extracellular matrixECM-receptor interaction 2.60.40.10 90 7 77 3.83 4.94
1jz7A02 75.40 Galactose metabolismGlycan structures - degradationGlycosaminoglycan degradationSphingolipid metabolismN-Glycan degradation 2.60.40.320 114 10 81 3.87 4.74
1fnhA02 75.40 Fibronectin precursorER-Golgi intermediate compartmentHomo sapiens 2.60.40.10 90 6 75 2.95 3.90
1ulvA03 75.27 Glucodextranase precursorArthrobacter globiformis 2.60.40.1560 86 10 76 3.77 4.92
1n26A03 74.96 Immune responseJak-STAT signaling pathwayEukaryotic plasma membrane / membrane attachedExtracellular regionInterleukin-6 receptor activity 2.60.40.10 104 6 82 4.09 4.97
2r39A00 74.87 Vibrio parahaemolyticusFixG-related protein 2.60.40.10 107 8 91 4.55 4.97
1bhgA02 74.61 Carbohydrate metabolic processBeta-glucuronidase activityHomo sapiensBeta-glucuronidase precursorGlycosaminoglycan catabolic process 2.60.40.320 104 8 79 3.77 4.75
1fnhA01 74.45 Fibronectin precursorER-Golgi intermediate compartmentHomo sapiens 2.60.40.10 90 6 78 3.42 4.36
1fnfA03 74.36 Fibronectin precursorER-Golgi intermediate compartmentHomo sapiens 2.60.40.10 89 11 74 3.61 4.83
1j8kA00 73.90 Fibronectin precursorER-Golgi intermediate compartmentHomo sapiens 2.60.40.10 94 10 83 4.05 4.87
3bgaA04 73.81 Galactose metabolismGlycan structures - degradationGlycosaminoglycan degradationSphingolipid metabolismBacteroides thetaiotaomicron 2.60.40.320 105 6 83 3.93 4.72
2gysA03 73.76 Jak-STAT signaling pathwayEukaryotic plasma membrane / membrane attachedReceptor activityGranulocyte macrophage colony-stimulating factor receptor complexInterleukin-5 receptor activity 2.60.40.10 86 5 71 3.48 4.84
2dtgE05 73.76 Protein heterotetramerizationPTB domain bindingPhosphoinositide 3-kinase bindingSignal transductionCarbohydrate metabolic process 2.60.40.10 98 4 81 3.32 4.08
1nepA00 73.69 Bos taurusEpididymal secretory protein E1 precursor 2.60.40.770 130 5 71 3.48 4.86
2gysA01 73.64 Jak-STAT signaling pathwayEukaryotic plasma membrane / membrane attachedReceptor activityGranulocyte macrophage colony-stimulating factor receptor complexInterleukin-5 receptor activity 2.60.40.10 95 6 74 3.58 4.79
3cmgA02 73.62 2.60.40.320 118 7 81 4.03 4.95
1fnfA02 73.53 Fibronectin precursorER-Golgi intermediate compartmentHomo sapiens 2.60.40.10 87 8 72 3.36 4.61
2fnbA00 72.94 Canis lupus familiarisFibronectin ED-B 2.60.40.10 95 8 76 3.64 4.75
2nziA03 72.26 TitinHomo sapiens 2.60.40.10 94 6 78 3.76 4.79
1g0dA01 71.91 Protein-glutamine gamma-glutamyltransferase 2Pagrus major 2.60.40.10 137 10 70 3.50 4.99
1ujtA00 71.76 Cell surfaceEukaryotic plasma membrane / membrane attachedCell adhesionProtein bindingBrain development 2.60.40.10 120 1 75 3.54 4.72
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Displaying entries 1 to 43 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1my7A00
TAELKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSM
QLRRPSDRELSEPMEFQYLPDTDDRHR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1my7A00
TAELKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSM
QLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRKR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:38

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:38

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:58

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"