CATH Domain: 1mxrA00 XML data for domain: 1mxrA00

Molscript image for 1mxrA00
1mxrA00
PDB coordinates for domain 1mxrA00

PDB 1mxr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.620 Ribonucleotide Reductase, subunit A
1.10.620.20 Ribonucleotide Reductase, subunit A Gene3D
1.10.620.20.2
1.10.620.20.2.1
1.10.620.20.2.1.1
1.10.620.20.2.1.1.1
1.10.620.20.2.1.1.1.1

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Segment boundaries for domain 1mxrA00

Chopping figure for domain 1mxrA00
DomainStart PDB ResidueStop PDB Residue
1mxrA00 1 339

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 1.10.620.20.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1syyA00 86.80 Pyrimidine metabolismRibonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]Purine metabolismChlamydia trachomatisRibonucleoside-diphosphate reductase subunit beta 1.10.620.20 317 20 91 3.87 4.22
1h0oA00 84.50 Pyrimidine metabolismPurine metabolismProtein heterotetramerizationRibonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]Glutathione metabolism 1.10.620.20 288 23 83 3.10 3.70
3dhzB00 84.27 Corynebacterium ammoniagenesRibonucleotide reductase subunit R2F 1.10.620.20 296 22 84 2.71 3.20
2rccA01 79.64 Pyrimidine metabolismRibonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]Purine metabolismRibonucleoside-diphosphate reductase subunit betaBacillus halodurans 1.10.620.20 240 22 69 2.94 4.21
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mxrA00
AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ
TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDEL
IEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL
HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG
LDLPFQTRSNPIPWINTWL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mxrA00
AYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQ
TLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDEL
IEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEAL
HLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVG
LDLPFQTRSNPIPWINTWL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:14

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:35

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"