CATH Domain: 1mwyA00 XML data for domain: 1mwyA00

Molscript image for 1mwyA00
1mwyA00
PDB coordinates for domain 1mwyA00

PDB 1mwy, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.100 Gene3D
3.30.70.100.17
3.30.70.100.17.1
3.30.70.100.17.1.1
3.30.70.100.17.1.1.1
3.30.70.100.17.1.1.1.1

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Segment boundaries for domain 1mwyA00

Chopping figure for domain 1mwyA00
DomainStart PDB ResidueStop PDB Residue
1mwyA00 2 74

Structural Neighbourhood (109 entries)

There are 109 matching structural neighberhood comparisons for CATH ID 3.30.70.100.17.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 109 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ofhX00 86.72 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Zinc-transporting ATPaseSynechocystis sp. PCC 6803 3.30.70.100 71 28 94 1.63 1.72
2kt2A00 86.70 Mercuric reductasePseudomonas aeruginosaMercuric reductase [EC:1.16.1.1] 3.30.70.100 69 21 93 2.26 2.43
2nyiA01 84.41 3.30.70.260 77 15 90 2.81 3.09
2x3dF01 84.28 Hypothetical proteinSulfolobus solfataricusPutative uncharacterized protein 3.30.70.1340 84 10 86 3.13 3.60
2f1fA01 83.72 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 15 87 2.85 3.26
1harA02 83.60 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 69 10 86 2.53 2.93
1y7pB01 83.44 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.30.70.260 80 6 83 2.43 2.90
2qmwA03 83.17 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysPrephenate dehydratase [EC:4.2.1.51]Similar to chorismate mutaseStaphylococcus aureus subsp. aureus Mu50 3.30.70.260 73 9 87 3.14 3.58
1lfpA03 82.82 UPF0082 protein aq_1575Aquifex aeolicus 3.30.70.980 73 10 87 2.80 3.19
1in0A01 82.29 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 14 91 2.82 3.07
1vr6A01 82.02 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysThermotoga maritima3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]Phospho-2-dehydro-3-deoxyheptonate aldolase 3.30.70.1140 75 8 92 3.63 3.95
1vi7A02 81.93 IMPACT family member yigZProtein bindingEscherichia coli K-12 3.30.70.240 71 14 90 3.13 3.46
1sc6A03 81.84 Glycine, serine and threonine metabolismMetabolic pathwaysD-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseEscherichia coli K-12 3.30.70.260 79 9 83 3.47 4.15
1earA02 81.79 Sporosarcina pasteuriiUrease accessory protein ureE 3.30.70.790 69 7 86 3.70 4.29
2nzcA00 81.72 Thermotoga maritimaPutative uncharacterized protein 3.30.70.1150 77 13 89 3.83 4.27
2rhsD06 81.39 Aminoacyl-tRNA biosynthesisStaphylococcus haemolyticus JCSC1435Phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chain 3.30.70.380 88 9 72 2.21 3.04
1u8sA01 81.07 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 86 16 82 2.81 3.40
1mw7A03 81.06 Helicobacter pyloriUPF0082 protein HP_0162 3.30.70.980 75 6 90 3.75 4.14
2fmrA00 80.84 CytoplasmSoluble fractionNucleolusHomo sapiensFragile X mental retardation 1 protein 3.30.1370.10 65 15 82 3.39 4.12
1u0sA00 80.71 Thermotoga maritimaBacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Protein binding 3.30.70.1110 86 15 80 2.90 3.61
2nyiA02 80.68 3.30.70.260 89 17 79 2.81 3.52
2qmxA03 80.52 Prephenate dehydratase [EC:4.2.1.51]Phenylalanine, tyrosine and tryptophan biosynthesisChlorobaculum tepidumMetabolic pathwaysPrephenate dehydratase 3.30.70.260 90 2 78 2.90 3.68
1zpvB00 80.27 ACT domain-containing proteinUPF0237 protein SP_0238Streptococcus pneumoniae 3.30.70.260 81 20 86 3.21 3.71
1nh8A03 80.26 Histidine metabolismMetabolic pathwaysATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Mycobacterium tuberculosis 3.30.70.120 67 7 75 2.54 3.37
1nm2A01 80.22 Fatty acid biosynthesisStreptomyces coelicolorMalonyl CoA:acyl carrier protein malonyltransferase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Metabolic pathways 3.30.70.250 68 10 84 3.15 3.71
1dloB02 80.20 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 93 10 76 2.58 3.38
1xxaC00 80.05 Transcriptional regulator of arginine metabolismArginine repressorEscherichia coli K-12Plasmid recombination 3.30.1360.40 73 6 73 3.57 4.83
1fxlA01 80.01 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 71 2 82 2.93 3.56
2do0A01 79.94 Protein domain specific bindingIntegral to plasma membraneParaspecklesAlternative nuclear mRNA splicing, via spliceosomeHeterogeneous nuclear ribonucleoprotein M 3.30.70.330 76 8 88 3.35 3.80
1s1tA02 79.94 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.70.270 93 12 72 2.57 3.57
1lwcB02 79.87 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.70.270 87 10 79 2.87 3.62
2hfvA01 79.78 Rhodopseudomonas palustrisPutative uncharacterized protein 3.30.70.790 77 15 81 3.22 3.94
1q5yD00 79.78 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 4 85 3.69 4.34
2i0xA01 79.31 Pyrococcus furiosusPutative uncharacterized protein 3.30.70.240 66 9 84 3.68 4.33
2hiyB01 79.25 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.1280 87 15 80 3.39 4.21
1konA03 79.23 UPF0082 protein yebCEscherichia coli K-12 3.30.70.980 75 12 89 3.41 3.82
2w25A02 79.13 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 3.30.70.920 81 5 80 3.44 4.29
2pehA01 79.12 Splicing factor 45SpliceosomeHomo sapiensProtein bindingSplicing factor 45 3.30.70.330 83 2 85 3.37 3.94
3ce8A00 79.05 Shewanella baltica OS155Putative uncharacterized protein 3.30.70.120 87 9 79 3.26 4.11
2zd1A02 78.98 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 94 12 74 2.81 3.77
1i1gA02 78.92 Pyrococcus furiosusHTH-type transcriptional regulator lrpALrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA 3.30.70.920 77 8 84 3.71 4.39
2dy1A03 78.89 Thermus thermophilus HB8Elongation factor EF-G [EC:3.6.5.3]Elongation factor G (EF-G-2) 3.30.70.870 76 8 88 4.31 4.89
1no8A00 78.88 THO complex subunit 4Mus musculusSpliceosomeSingle-stranded DNA bindingRNA binding 3.30.70.330 78 5 87 3.49 4.00
1usmA00 78.83 Transcriptional coactivatorThermus thermophilus 3.30.1360.20 77 4 81 3.82 4.67
2pgcA01 78.73 3.30.70.900 95 8 75 3.54 4.67
2j8sA06 78.48 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1430 105 9 68 2.67 3.89
2fgcA03 78.45 Butanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesisValine, leucine and isoleucine biosynthesisMetabolic pathways 3.30.70.1150 74 5 85 3.80 4.46
3dlkB02 78.31 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 98 10 72 2.96 4.09
1jx4A02 78.30 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]DNA polymerase IVSulfolobus solfataricus 3.30.70.270 96 4 68 2.98 4.33
1xtzA02 78.29 Identical protein bindingNucleusRibose-5-phosphate isomerasePyridoxine biosynthetic processRibose 5-phosphate isomerase A [EC:5.3.1.6] 3.30.70.260 84 5 72 2.79 3.84
1eayD00 78.29 Bacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Escherichia coli K-12Chemotaxis protein cheA 3.30.70.400 69 15 90 3.80 4.20
1s99A01 78.21 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 77 8 89 3.74 4.17
1rk8A00 78.04 SpliceosomeRNA-binding protein 8AMicrotubule cytoskeleton organizationNucleusDrosophila melanogaster 3.30.70.330 87 8 81 3.16 3.87
2od4B01 78.03 3.30.70.900 81 4 86 3.67 4.25
1s2oA02 78.02 Synechocystis sp. PCC 6803Slr0953 protein 3.90.1070.10 71 7 73 3.37 4.56
1nzaA00 77.98 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 8 67 2.75 4.05
1l3kA02 77.95 Heterogeneous nuclear ribonucleoprotein A1NucleolusProtein bindingCytoplasmSpliceosome 3.30.70.330 78 8 84 3.76 4.44
1cvjA01 77.86 Poly(A) RNA bindingTranslation activator activityProtein C-terminus bindingMRNA polyadenylationPolyadenylate-binding protein 1 3.30.70.330 77 4 83 3.11 3.74
1fjeB01 77.79 NucleolinMesocricetus auratus 3.30.70.330 81 10 79 3.79 4.80
1u7lA01 77.78 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]Oxidative phosphorylationVacuolar acidificationProtein bindingVacuolar proton-transporting V-type ATPase, V1 domain 3.30.70.1180 91 10 71 3.52 4.93
2pd1A01 77.75 Nitrosomonas europaeaPutative uncharacterized protein 3.30.70.900 93 9 78 3.45 4.40
1rwuA00 77.75 Hypothetical proteinUPF0250 protein ybeDEscherichia coli K-12 3.30.70.1460 87 12 78 2.99 3.83
1s99A02 77.73 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 81 6 82 4.05 4.90
1qm9A02 77.67 Polypyrimidine tract-binding protein 1Poly-pyrimidine tract bindingHeterogeneous nuclear ribonucleoprotein complexMRNA processingNucleolus 3.30.70.330 89 6 77 3.53 4.55
3c19A01 77.66 Methanopyrus kandleriUncharacterized conserved protein 3.30.70.1380 98 9 68 2.67 3.91
2errA01 77.63 Fox-1 homolog AProtein C-terminus bindingHomo sapiensTrans-Golgi network 3.30.70.330 83 10 84 3.03 3.59
2nuhA00 77.62 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 8 67 2.77 4.12
1kn6A00 77.62 Mus musculusPeptide hormone processingSerine-type endopeptidase activityNeuroendocrine convertase 1Proprotein convertase subtilisin/kexin type 1 [EC:3.4.21.93] 3.30.70.850 73 2 89 4.44 4.99
1x5uA01 77.54 SpliceosomeSpliceosomal complexHomo sapiensSplicing factor 3B subunit 4Splicing factor 3B subunit 4 3.30.70.330 80 6 81 3.22 3.96
1xmbA02 77.50 Auxin metabolic processArabidopsis thalianaIAA-Ala conjugate hydrolase activityIAA-amino acid hydrolase ILR1-like 2 3.30.70.360 101 12 72 2.93 4.05
1jqgA01 77.34 Carboxypeptidase AHelicoverpa armigera 3.30.70.340 91 12 75 3.54 4.67
2j8sA07 77.23 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1440 94 6 77 3.60 4.64
1x5oA01 77.16 RNA processingHomo sapiensProtein bindingRNA-binding motif, single-stranded-interacting protein 1 3.30.70.330 86 5 74 3.19 4.29
2j8sA03 77.12 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1320 100 17 71 3.35 4.72
2qfjA02 77.02 Homo sapiensPoly(U)-binding-splicing factor PUF60Protein binding 3.30.70.330 87 6 79 3.26 4.11
2ia0B02 76.98 Pyrococcus furiosusUncharacterized HTH-type transcriptional regulator PF0864 3.30.70.920 99 12 66 2.80 4.20
2asbA03 76.86 N utilization substance protein ATranscription elongation protein nusAMycobacterium tuberculosis 3.30.300.20 72 16 76 3.40 4.43
2u2fA00 76.78 Splicing factor U2AF 65 kDa subunitSpliceosomeSpliceosomal complexSplicing factor U2AF 65 kDa subunitEnzyme binding 3.30.70.330 85 4 78 3.76 4.77
2dclA00 76.48 Pyrococcus horikoshiiUPF0166 protein PH1503 3.30.70.120 99 6 69 3.17 4.55
1u8sA02 76.41 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 84 9 83 4.01 4.81
1gmuA01 76.27 Klebsiella aerogenesUrease accessory protein ureE 3.30.70.790 67 7 79 3.53 4.44
1sjqA00 76.26 Polypyrimidine tract-binding protein 1Poly-pyrimidine tract bindingHeterogeneous nuclear ribonucleoprotein complexNucleolusMRNA processing 3.30.70.330 88 6 80 3.91 4.85
1wr8A02 76.22 Pyrococcus horikoshiiPhosphoglycolate phosphatase 3.90.1070.10 69 8 82 3.51 4.27
3cedA00 76.21 ABC transportersD-methionine transport system ATP-binding proteinMethionine import ATP-binding protein MetN 2Staphylococcus aureus subsp. aureus Mu50 3.30.70.260 97 9 71 3.47 4.88
1l3kA01 76.11 Heterogeneous nuclear ribonucleoprotein A1NucleolusProtein bindingCytoplasmSpliceosome 3.30.70.330 84 6 82 3.57 4.35
1wqgA02 76.05 Ribosome recycling factorMycobacterium tuberculosisRibosome-recycling factor 3.30.1360.40 75 9 77 3.73 4.82
2rb7A02 75.91 Peptidase, M20/M25/M40 familyDesulfovibrio desulfuricans subsp. desulfuricans str. G20 3.30.70.360 98 4 71 3.41 4.77
1dj0A02 75.80 TRNA pseudouridine synthesisTRNA pseudouridine synthase ATRNA bindingPseudouridine synthase activityTRNA pseudouridine synthase A [EC:5.4.99.12] 3.30.70.580 107 9 68 2.97 4.35
2dgsA01 75.68 CytoplasmDAZ-associated protein 1NucleusRNA bindingHomo sapiens 3.30.70.330 89 6 77 3.34 4.31
2ywwA01 75.62 Pyrimidine metabolismMethanocaldococcus jannaschiiAspartate carbamoyltransferase regulatory subunitAlanine, aspartate and glutamate metabolismAspartate carbamoyltransferase regulatory chain 3.30.70.140 91 5 74 3.49 4.67
1fxlA02 75.55 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 77 9 81 3.80 4.64
1o8bA02 75.45 Pentose phosphate pathwayMetabolic pathwaysRibose 5-phosphate isomerase A [EC:5.3.1.6]Escherichia coli K-12Ribose-5-phosphate isomerase A 3.30.70.260 69 13 80 3.79 4.69
1d8zA00 75.45 Mus musculusAU-rich element bindingELAV like protein 2/3/4ELAV-like protein 3 3.30.70.330 89 8 79 3.54 4.44
2v8hA02 75.43 Beta-alanine synthaseLachancea kluyveri 3.30.70.360 116 13 62 2.97 4.72
1jmtA00 75.40 Spliceosomal complexSplicing factor U2AF 35 kDa subunitCajal bodyHomo sapiensProtein binding 3.30.70.330 98 8 72 3.55 4.90
2x1fA00 75.39 Protein heterodimerization activityMRNA 3'-end-processing protein RNA15MRNA polyadenylationSaccharomyces cerevisiaeMRNA cleavage 3.30.70.330 94 2 72 3.59 4.96
1sxlA00 75.23 Sex differentiationDrosophila melanogasterProtein complexPoly-pyrimidine tract bindingNegative regulation of translation 3.30.70.330 97 9 71 3.23 4.54
1j27A00 75.20 Hypothetical proteinThermus thermophilusPutative uncharacterized protein 3.30.70.1120 98 8 70 3.37 4.79
1utaA00 75.14 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 9 88 3.61 4.09
1m1hA01 75.09 Transcriptional antiterminator NusGTranscription antitermination protein nusGAquifex aeolicus 3.30.70.940 100 12 71 3.17 4.46
2wriY03 74.46 Thermus thermophilus HB8Elongation factor GElongation factor EF-G [EC:3.6.5.3] 3.30.70.870 76 4 94 4.65 4.91
1vgyA02 74.41 Succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]Neisseria meningitidis serogroup BLysine biosynthesisMetabolic pathwaysSuccinyl-diaminopimelate desuccinylase 3.30.70.360 114 9 64 3.11 4.86
1fjeB02 74.41 NucleolinMesocricetus auratus 3.30.70.330 84 4 82 4.08 4.97
1cg2A02 74.24 Pseudomonas sp. RS-16Carboxypeptidase G2 3.30.70.360 110 8 64 2.71 4.20
1r8hA00 73.97 Human papillomavirus type 6aRegulatory protein E2 3.30.70.330 87 5 78 3.85 4.93
1yx2A02 73.82 Nitrogen metabolismAminomethyltransferase [EC:2.1.2.10]One carbon pool by folateBacillus subtilisGlycine, serine and threonine metabolism 3.30.70.1400 81 5 74 3.65 4.93
2fyxA00 73.63 Putative transposaseTransposase, putativeDeinococcus radiodurans 3.30.70.1290 130 8 54 2.49 4.56
1vk8A00 73.41 Thermotoga maritimaPutative uncharacterized protein 3.30.70.930 91 10 65 2.79 4.23
1sjrA00 73.34 Polypyrimidine tract-binding protein 1Poly-pyrimidine tract bindingHeterogeneous nuclear ribonucleoprotein complexNucleolusMRNA processing 3.30.70.330 108 6 65 3.28 4.99
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Displaying entries 1 to 109 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mwyA00
SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQAAE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mwyA00
SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQAAE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:59

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:59

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:26

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"