CATH Domain: 1mw9X04 XML data for domain: 1mw9X04

Molscript image for 1mw9X04
1mw9X04
PDB coordinates for domain 1mw9X04

PDB 1mw9, Chain X, Domain 4

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.290 Topoisomerase I; domain 4
1.10.290.10 Topoisomerase I, domain 4 Gene3D
1.10.290.10.1
1.10.290.10.1.1
1.10.290.10.1.1.1
1.10.290.10.1.1.1.1
1.10.290.10.1.1.1.1.1

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Segment boundaries for domain 1mw9X04

Chopping figure for domain 1mw9X04
DomainStart PDB ResidueStop PDB Residue
1mw9X01 2 163
1mw9X02 164 212
1mw9X02 474 587
1mw9X03 213 279
1mw9X03 405 473
1mw9X04 280 404

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.290.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gkuB08 91.36 Reverse gyraseReverse gyrase [EC:5.99.1.3 3.6.1.-]Archaeoglobus fulgidus 1.10.290.10 119 30 87 1.47 1.68
1i7dA04 86.42 DNA topoisomerase III [EC:5.99.1.2]Protein bindingEscherichia coli K-12DNA topoisomerase 3 1.10.290.10 127 24 87 3.24 3.71
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mw9X04
PGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYAREA
IRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mw9X04
PGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKE
NSQEAREAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:17

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"