CATH Domain: 1mw9X01 XML data for domain: 1mw9X01

Molscript image for 1mw9X01
1mw9X01
PDB coordinates for domain 1mw9X01

PDB 1mw9, Chain X, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.140 Gene3D
3.40.50.140.1
3.40.50.140.1.1
3.40.50.140.1.1.1
3.40.50.140.1.1.1.1
3.40.50.140.1.1.1.1.1

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Segment boundaries for domain 1mw9X01

Chopping figure for domain 1mw9X01
DomainStart PDB ResidueStop PDB Residue
1mw9X01 2 163
1mw9X02 164 212
1mw9X02 474 587
1mw9X03 213 279
1mw9X03 405 473
1mw9X04 280 404

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.140.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gkuB05 87.21 Reverse gyraseReverse gyrase [EC:5.99.1.3 3.6.1.-]Archaeoglobus fulgidus 3.40.50.140 121 29 73 1.56 2.13
1i7dA01 83.99 DNA topoisomerase III [EC:5.99.1.2]Protein bindingEscherichia coli K-12DNA topoisomerase 3 3.40.50.140 156 18 80 2.41 2.98
1q57G02 80.12 Enterobacteria phage T7DNA primase/helicase 3.40.1360.10 126 13 72 2.81 3.87
2bfdB02 77.53 Mitochondrial alpha-ketoglutarate dehydrogenase complexCarboxy-lyase activityValine, leucine and isoleucine degradationBranched chain family amino acid catabolic processMetabolic pathways 3.40.50.920 125 9 68 3.18 4.65
1dd9A02 77.32 DNA replicationCytoplasmZinc ion bindingDNA primase [EC:2.7.7.-]DNA primase activity 3.40.1360.10 126 14 69 3.06 4.43
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mw9X01
GKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKAD
HIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mw9X01
MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWE
AHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
RVN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:12

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:17

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"