CATH Domain: 1mveA00 XML data for domain: 1mveA00

Molscript image for 1mveA00
1mveA00
PDB coordinates for domain 1mveA00

PDB 1mve, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.200 Gene3D
2.60.120.200.10
2.60.120.200.10.1
2.60.120.200.10.1.1
2.60.120.200.10.1.1.2
2.60.120.200.10.1.1.2.1

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Segment boundaries for domain 1mveA00

Chopping figure for domain 1mveA00
DomainStart PDB ResidueStop PDB Residue
1mveA00 2 243

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.60.120.200.10.1.1.2.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dypA00 77.26 Kappa-carrageenasePseudoalteromonas carrageenovora 2.60.120.200 266 10 58 2.30 3.95
1o4yA00 77.19 Zobellia galactanivoransBeta-agarase A 2.60.120.200 270 10 59 2.52 4.23
1upsB01 76.49 Clostridium perfringensGlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase 2.60.120.200 265 11 61 3.09 4.99
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mveA00
VSAKDFSGAELYTLEEVQYGKFEARKAAASGTVSSFLYQNGSEIADGRPWVEVDIEVLGKNPGSFQSNIITGKAGAQKTS
EKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTEGGQVSNLTGTQGLRFNLWSSESAAWVGQFDESKLPLFQFIN
WVKVYKYTPGQGEGGSDFTLDWTDNFDTFDGSRWGKGDWTFDGNRVDLTDKNIYSRDGLILALTRKGQESFNGQVPRD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mveA00
XVSAKDFSGAELYTLEEVQYGKFEARXKXAAASGTVSSXFLYQNGSEIADGRPWVEVDIEVLGKNPGSFQSNIITGKAGA
QKTSEKHHAVSPAADQAFHTYGLEWTPNYVRWTVDGQEVRKTEGGQVSNLTGTQGLRFNLWSSESAAWVGQFDESKLPLF
QFINWVKVYKYTPGQGEGGSDFTLDWTDNFDTFDGSRWGKGDWTFDGNRVDLTDKNIYSRDGXLILALTRKGQESFNGQV
PRD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"