CATH Domain: 1mv8A01 XML data for domain: 1mv8A01

Molscript image for 1mv8A01
1mv8A01
PDB coordinates for domain 1mv8A01

PDB 1mv8, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.6
3.40.50.720.6.1
3.40.50.720.6.1.1
3.40.50.720.6.1.1.1
3.40.50.720.6.1.1.1.1

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Segment boundaries for domain 1mv8A01

Chopping figure for domain 1mv8A01
DomainStart PDB ResidueStop PDB Residue
1mv8A01 1 202
1mv8A02 203 234
1mv8A03 235 436

Structural Neighbourhood (35 entries)

There are 35 matching structural neighberhood comparisons for CATH ID 3.40.50.720.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 35 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3gg2B01 91.97 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsSugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase familyUDPglucose 6-dehydrogenase [EC:1.1.1.22] 3.40.50.720 197 33 97 1.97 2.03
2o3jB01 88.66 Caenorhabditis elegansAmino sugar and nucleotide sugar metabolismIdentical protein bindingEmbryo development ending in birth or egg hatchingMetabolic pathways 3.40.50.720 205 31 92 1.71 1.85
1dljA01 88.37 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.720 204 24 90 1.88 2.07
1bg6A01 82.38 Arthrobacter sp. 1COpine dehydrogenase 3.40.50.720 192 15 85 3.09 3.63
1f0yA01 81.72 Hydroxyacyl-coenzyme A dehydrogenase, mitochondrialHomo sapiens 3.40.50.720 196 11 83 3.12 3.73
2zydB01 81.17 Pentose phosphate pathwayGlutathione metabolismMetabolic pathways6-phosphogluconate dehydrogenase, decarboxylating6-phosphogluconate dehydrogenase [EC:1.1.1.44] 3.40.50.720 179 12 79 2.50 3.14
1txgA01 80.68 Archaeoglobus fulgidusGlycerophospholipid metabolismGlycerol-3-phosphate dehydrogenase [NAD(P)+]Glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] 3.40.50.720 180 17 84 2.65 3.15
3ckyA01 80.29 Eubacterium barkeri2-hydroxymethyl glutarate dehydrogenase 3.40.50.720 163 17 78 2.96 3.78
1np3B01 80.16 Pantothenate and CoA biosynthesisMetabolic pathwaysValine, leucine and isoleucine biosynthesisKetol-acid reductoisomerasePseudomonas aeruginosa 3.40.50.720 182 15 77 2.66 3.44
1vpdA01 80.06 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysSalmonella enterica subsp. enterica serovar Typhimurium2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]Tartronate semialdehyde reductase (TSAR) 3.40.50.720 154 13 73 2.62 3.55
2ew2B01 79.58 2-dehydropantoate 2-reductase [EC:1.1.1.169]Pantothenate and CoA biosynthesis2-dehydropantoate 2-reductaseMetabolic pathwaysEnterococcus faecalis 3.40.50.720 174 12 81 3.46 4.26
2cvzA01 79.25 Valine, leucine and isoleucine degradationMetabolic pathwaysThermus thermophilus HB83-hydroxyisobutyrate dehydrogenase3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] 3.40.50.720 153 14 75 2.70 3.59
1jayA00 79.21 Archaeoglobus fulgidusPutative uncharacterized protein 3.40.50.720 212 11 78 2.90 3.70
1ur5C01 78.80 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 14 64 2.72 4.23
3d1lB01 78.59 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.50.720 151 13 72 2.72 3.74
1i36A01 78.52 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.720 159 17 73 2.69 3.65
1evyA01 78.38 Glycerol-3-phosphate dehydrogenase [NAD+], glycosomalLeishmania mexicana 3.40.50.720 198 13 85 3.31 3.89
2qytA01 78.25 Porphyromonas gingivalis2-dehydropantoate 2-reductase 3.40.50.720 179 15 77 3.07 3.98
2amfA01 78.23 Arginine and proline metabolismMetabolic pathwaysPutative pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2]Streptococcus pyogenes serotype M1 3.40.50.720 148 12 71 2.59 3.61
2pv7A01 78.16 T-proteinNovobiocin biosynthesisHaemophilus influenzaePhenylalanine, tyrosine and tryptophan biosynthesisPrephenate dehydrogenase [EC:1.3.1.12] 3.40.50.720 154 13 67 2.55 3.76
2rcyA01 77.98 Arginine and proline metabolismMetabolic pathwaysPlasmodium falciparum 3D7Pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2] 3.40.50.720 148 8 68 2.73 4.00
1t2dA01 77.88 L-lactate dehydrogenaseCysteine and methionine metabolismGlycolysis / GluconeogenesisPyruvate metabolismPlasmodium falciparum CDC/Honduras 3.40.50.720 148 11 64 2.84 4.41
6ldhA01 77.62 Squalus acanthiasL-lactate dehydrogenase A chain 3.40.50.720 162 14 65 2.68 4.10
3hhpA01 77.62 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 15 63 2.68 4.20
1hyhA01 77.56 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.40.50.720 141 18 65 3.18 4.83
1ks9A01 77.30 Pantothenate and CoA biosynthesisMetabolic pathways2-dehydropantoate 2-reductase [EC:1.1.1.169]2-dehydropantoate 2-reductase activityPantothenate biosynthetic process from valine 3.40.50.720 167 11 75 3.09 4.08
3c24A01 77.14 Jannaschia sp. CCS1Putative uncharacterized protein 3.40.50.720 168 11 73 3.33 4.51
3d0oA01 77.13 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.40.50.720 143 13 64 2.83 4.40
1hyeA01 76.78 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 14 63 2.74 4.32
1o6zA02 76.72 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 14 63 2.96 4.64
1qmgB01 76.60 NADPH bindingProtein homodimerization activityMagnesium ion bindingSpinacia oleraceaKetol-acid reductoisomerase, chloroplastic 3.40.50.720 216 7 73 3.41 4.63
2rafB01 75.75 [EC:1.-.-.-]OxidoreductaseLactobacillus plantarum 3.40.50.720 176 8 66 2.92 4.40
1y7tA01 75.52 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 153 14 65 3.00 4.59
2i76A01 75.20 Thermotoga maritimaPutative uncharacterized protein 3.40.50.720 142 14 69 2.74 3.95
2eggA02 73.07 Shikimate 5-dehydrogenase [EC:1.1.1.25]Geobacillus kaustophilusPhenylalanine, tyrosine and tryptophan biosynthesisShikimate 5-dehydrogenaseMetabolic pathways 3.40.50.720 140 7 57 2.88 4.97
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Displaying entries 1 to 35 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mv8A01
MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS
FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLR
ESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIRKT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mv8A01
MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS
FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLR
ESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIRKT
BLAST against CATH

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Domain History Events (10)

Domain assigned by auto on 15 Aug 2007 02:42

Assigning to "3.40.50.720" based on similarity with "1mfzA01"

Flow stage update by auto on 15 Aug 2007 02:32

No in_process hits for Domain "1mv8A01" ready to be processed

Update comment by auto on 15 Aug 2007 01:18

Domain "1mv8A01" hits Domain "1muuC01" (99.009900990099% over 100%) which is currently in process

Update comment by auto on 14 Aug 2007 23:53

Domain "1mv8A01" hits Domain "1mfzC01" (99.009900990099% over 100%) which is currently in process

Update comment by auto on 14 Aug 2007 22:44

Domain "1mv8A01" hits Domain "1mfzB01" (99.009900990099% over 100%) which is currently in process

Flow stage update by auto on 14 Mar 2007 15:08

Domain "1mv8A01" hits Domain "1mfzD01" (99.009900990099% over 100%) which is currently in process

Flow stage update by auto on 14 Mar 2007 15:06

NW result present for Domain "1mv8A01"

Flow stage update by auto on 14 Mar 2007 15:02

All required files are present for Domain "1mv8A01"

Flow stage update by auto on 14 Mar 2007 15:00

Beginning processing for Domain "1mv8A01"

Insertion by auto on 15 Dec 2006 07:22

Final ChopClose added based on similarity with "1mfzA"