CATH Domain: 1mo9A01 XML data for domain: 1mo9A01

Molscript image for 1mo9A01
1mo9A01
PDB coordinates for domain 1mo9A01

PDB 1mo9, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.50 FAD/NAD(P)-binding domain
3.50.50.60 Gene3D
3.50.50.60.5
3.50.50.60.5.1
3.50.50.60.5.1.1
3.50.50.60.5.1.1.1
3.50.50.60.5.1.1.1.1

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Segment boundaries for domain 1mo9A01

Chopping figure for domain 1mo9A01
DomainStart PDB ResidueStop PDB Residue
1mo9A01 2 85
1mo9A01 132 186
1mo9A01 314 378
1mo9A02 87 131
1mo9A02 197 244
1mo9A02 270 311
1mo9A03 254 268
1mo9A03 386 523

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 3.50.50.60.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1fl2A01 85.72 Alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]Alkyl hydroperoxide reductase subunit FProtein bindingEscherichia coli K-12Cytosol 3.50.50.60 186 19 77 2.28 2.94
1trbA01 83.72 Pyrimidine metabolismThioredoxin reductase (NADPH) [EC:1.8.1.9]Thioredoxin reductaseProtein bindingEscherichia coli K-12 3.50.50.60 187 18 78 3.25 4.12
3fbsB01 83.58 Agrobacterium tumefaciens str. C58Oxidoreductase 3.50.50.60 188 17 77 2.77 3.55
1xhcA01 83.57 Pyrococcus furiosusNADH oxidase /nitrite reductase 3.50.50.60 180 19 76 2.34 3.04
1q1rA01 83.18 Putidaredoxin reductasePseudomonas putida 3.50.50.60 195 17 78 2.66 3.39
2gqwA01 82.79 Ferredoxin reductasePseudomonas sp. KKS102 3.50.50.60 181 20 73 2.61 3.55
1gteA03 82.76 Pyrimidine metabolismSus scrofaProtein homodimerization activityDihydropyrimidine dehydrogenase [NADP+]Dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2] 3.50.50.60 196 14 76 2.74 3.58
1nhpA01 82.15 NADH peroxidaseNADH peroxidase [EC:1.11.1.1]Enterococcus faecalis 3.50.50.60 167 21 66 2.07 3.10
1fcdA01 81.53 Allochromatium vinosumSulfide dehydrogenase [flavocytochrome c] flavoprotein chain 3.50.50.60 188 14 77 2.63 3.40
1rsgB01 80.03 CytoplasmPolyamine oxidase FMS1Polyamine catabolic processSaccharomyces cerevisiaePrimary amine oxidase activity 3.50.50.60 181 17 72 3.09 4.26
3kkjA01 79.22 Pseudomonas syringae pv. tomatoAmine oxidase, flavin-containing protein 3.50.50.60 150 19 69 3.13 4.53
1cjcA01 78.82 Flavin adenine dinucleotide bindingBos taurusSteroid biosynthetic processFerredoxin-NADP+ reductase activityNADP or NADPH binding 3.40.50.720 214 9 64 2.72 4.22
1lqtA01 78.29 Ferredoxin--NADP+ reductase [EC:1.18.1.2]NADPH-ferredoxin reductase fprAMycobacterium tuberculosis 3.40.50.720 213 11 64 2.95 4.55
3cgvA01 78.12 3.50.50.60 219 15 63 3.06 4.79
3c4aA01 76.54 Chromobacterium violaceumProbable tryptophan hydroxylase vioD 3.50.50.60 213 8 62 3.00 4.80
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mo9A01
KVWNARNDHLTINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGS
CPHNGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPEQPRSAELAKILGLDLGPKGE
VLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mo9A01
MKVWNARNDHLTINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG
SCPHNGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPEQPRSAELAKILGLDLGPKG
EVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGE
BLAST against CATH

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Domain History Events (2)

Domain assigned by lewis on 09 Aug 2006 17:12

Automatically fixing a bunch of choppings that have domains with misordered segments. Here the domain is being reassigned back to its original superfamily. This work is done under ticket:98.

Insertion by lewis on 09 Aug 2006 17:12

Automatically fixing a bunch of choppings that have domains with misordered segments. Here the chopping is being reinserted but with the segments reordered in the domains. The domains should not be reordered. This work is done under ticket:98.