CATH Domain: 1ml4A02 XML data for domain: 1ml4A02

Molscript image for 1ml4A02
1ml4A02
PDB coordinates for domain 1ml4A02

PDB 1ml4, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1370 Gene3D
3.40.50.1370.1
3.40.50.1370.1.1
3.40.50.1370.1.1.1
3.40.50.1370.1.1.1.1
3.40.50.1370.1.1.1.1.1

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Segment boundaries for domain 1ml4A02

Chopping figure for domain 1ml4A02
DomainStart PDB ResidueStop PDB Residue
1ml4A01 2 134
1ml4A01 293 308
1ml4A02 135 292

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.40.50.1370.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1othA02 87.80 Arginine and proline metabolismHomo sapiensOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathwaysOrnithine carbamoyltransferase, mitochondrial 3.40.50.1370 159 20 94 1.95 2.05
3grfA02 87.02 Arginine and proline metabolismGiardia intestinalisOrnithine carbamoyltransferaseOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathways 3.40.50.1370 165 18 89 2.00 2.23
1js1X02 85.92 N-acetylornithine carbamoyltransferaseBacteroides thetaiotaomicronN-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] 3.40.50.1370 152 16 92 3.49 3.78
3d6nB02 85.84 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 144 28 86 2.14 2.47
3kznA02 85.39 N-acetylornithine carbamoyltransferaseXanthomonas campestris pv. campestrisN-acetylornithine carbamoyltransferase [EC:2.1.3.9] 3.40.50.1370 170 15 90 2.96 3.27
1duvG02 85.19 Arginine and proline metabolismMetabolic pathwaysOrnithine carbamoyltransferase activityOrnithine carbamoyltransferase [EC:2.1.3.3]Ornithine carbamoyltransferase chain I 3.40.50.1370 183 22 83 2.04 2.44
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ml4A02
HPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTT
LEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ml4A02
HPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTT
LEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:15

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"