CATH Domain: 1ml4A01 XML data for domain: 1ml4A01

Molscript image for 1ml4A01
1ml4A01
PDB coordinates for domain 1ml4A01

PDB 1ml4, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1370 Gene3D
3.40.50.1370.5
3.40.50.1370.5.1
3.40.50.1370.5.1.1
3.40.50.1370.5.1.1.1
3.40.50.1370.5.1.1.1.1

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Segment boundaries for domain 1ml4A01

Chopping figure for domain 1ml4A01
DomainStart PDB ResidueStop PDB Residue
1ml4A01 2 134
1ml4A01 293 308
1ml4A02 135 292

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.1370.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ef0A01 89.87 Thermus thermophilus HB8Arginine and proline metabolismOrnithine carbamoyltransferaseOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathways 3.40.50.1370 144 29 94 2.02 2.13
3d6nB01 88.97 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 147 34 91 2.22 2.41
1js1Y01 85.06 N-acetylornithine carbamoyltransferaseBacteroides thetaiotaomicronN-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] 3.40.50.1370 164 23 85 2.97 3.45
2fvyA01 77.06 Bacterial chemotaxisABC transportersMethyl-galactoside transport system substrate-binding proteinD-galactose-binding periplasmic proteinEscherichia coli K-12 3.40.50.2300 147 9 68 3.34 4.88
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ml4A01
DWKGRDVISIRDFSKEDIETVLATAERLERELKEKGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEAST
SSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQGVPVRMALLALVLGVI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ml4A01
MDWKGRDVISIRDFSKEDIETVLATAERLERELKEKGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEAS
TSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQGVPVRMALLALVLGVI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:15

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"