CATH Domain: 1mj4A00 XML data for domain: 1mj4A00

Molscript image for 1mj4A00
1mj4A00
PDB coordinates for domain 1mj4A00

PDB 1mj4, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.120 Flavocytochrome B2; Chain A, domain 1
3.10.120.10 Flavocytochrome B2, subunit A, domain 1 Gene3D
3.10.120.10.2
3.10.120.10.2.1
3.10.120.10.2.1.1
3.10.120.10.2.1.1.1
3.10.120.10.2.1.1.1.1

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Segment boundaries for domain 1mj4A00

Chopping figure for domain 1mj4A00
DomainStart PDB ResidueStop PDB Residue
1mj4A00 3 82

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.10.120.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cxyA00 90.94 Ectothiorhodospira shaposhnikoviiSoluble cytochrome b558 3.10.120.10 81 29 96 1.88 1.95
1x3xA00 90.00 Ascaris suumCytochrome b5 3.10.120.10 82 31 93 1.91 2.03
2ibjA00 89.68 Musca domesticaCytochrome b5 3.10.120.10 86 30 88 1.56 1.77
3ks0A00 83.61 L-lactate dehydrogenase (cytochrome) activityL-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]Pyruvate metabolismLactate metabolic processMetabolic pathways 3.10.120.10 92 25 81 2.27 2.78
1j03A00 79.39 Probable steroid-binding protein 3Arabidopsis thaliana 3.10.120.10 102 17 74 3.72 4.99
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mj4A00
STHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQSHVRELLAQYKIGEL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mj4A00
QESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQSHVRELLAQYKIG
EL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"