CATH Domain: 1mhnA00 XML data for domain: 1mhnA00

Molscript image for 1mhnA00
1mhnA00
PDB coordinates for domain 1mhnA00

PDB 1mhn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.30 SH3 type barrels.
2.30.30.140 Gene3D
2.30.30.140.2
2.30.30.140.2.1
2.30.30.140.2.1.1
2.30.30.140.2.1.1.1
2.30.30.140.2.1.1.1.1

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Segment boundaries for domain 1mhnA00

Chopping figure for domain 1mhnA00
DomainStart PDB ResidueStop PDB Residue
1mhnA00 89 147

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 2.30.30.140.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1khcA01 87.50 Protein complex localizationDNA methylationNucleusDNA (cytosine-5)-methyltransferase 3BHeterochromatin 2.30.30.160 65 16 83 2.03 2.44
2hqxA01 84.22 Staphylococcal nuclease domain-containing protein 1NucleusTranscription cofactor activityHomo sapiensProtein binding 2.30.30.140 81 25 70 2.29 3.25
1pfbA00 81.70 Specification of segmental identity, abdomenPRC1 complexMethylated histone residue bindingNucleusPolycomb group protein Pc 2.40.50.40 55 12 71 3.54 4.97
1ib8A02 81.38 Hypothetical proteinUPF0090 protein SP_0552Streptococcus pneumoniae 2.30.30.180 67 8 85 3.19 3.75
3f70B02 80.67 MRNA synthesisNucleusLethal(3)malignant brain tumor-like 2 proteinRNA bindingHomo sapiens 2.30.30.160 88 5 64 2.48 3.83
1irxA02 79.98 Aminoacyl-tRNA biosynthesisLysyl-tRNA synthetase, class IPyrococcus horikoshiiLysyl-tRNA synthetaseLysine biosynthesis 2.30.30.300 43 9 72 2.29 3.14
1uebA02 79.82 Thermus thermophilus HB8Elongation factor EF-PElongation factor P 2.40.50.140 63 6 61 2.46 3.97
1oz2A02 78.89 Lethal(3)malignant brain tumor-like proteinHomo sapiensProtein binding 2.30.30.160 104 15 54 1.98 3.61
3f70A03 78.66 MRNA synthesisNucleusLethal(3)malignant brain tumor-like 2 proteinRNA bindingHomo sapiens 2.30.30.160 101 13 54 2.48 4.55
2bivA01 78.35 Sex comb on midleg-like protein 2NucleusTranscription factor activityAssembly of protein complexesTranscription repression 2.30.30.160 108 22 52 1.92 3.64
1n27A00 77.58 CytoplasmNucleusMus musculusGrowth regulators / regulation of cell sizeHepatoma-derived growth factor-related protein 3 2.30.30.160 96 16 60 2.74 4.54
1oz2A03 77.38 Lethal(3)malignant brain tumor-like proteinHomo sapiensProtein binding 2.30.30.160 108 11 52 2.13 4.04
1oz2A01 77.18 Lethal(3)malignant brain tumor-like proteinHomo sapiensProtein binding 2.30.30.160 112 11 50 2.18 4.28
1tovA00 76.92 Caenorhabditis elegansTubulin-specific chaperone B 2.30.30.190 97 11 59 2.78 4.65
1kl9A01 76.22 2.40.50.140 72 8 58 2.81 4.82
2f1lA02 76.15 16S rRNA-processing protein rimMPseudomonas aeruginosa16S rRNA processing protein RimM 2.30.30.240 72 15 73 3.49 4.74
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mhnA00
LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mhnA00
LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:48

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"