CATH Domain: 1mhnA00 XML data for domain: 1mhnA00

Molscript image for 1mhnA00
1mhnA00
PDB coordinates for domain 1mhnA00

PDB 1mhn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.30 SH3 type barrels.
2.30.30.140 Gene3D
2.30.30.140.2
2.30.30.140.2.1
2.30.30.140.2.1.1
2.30.30.140.2.1.1.1
2.30.30.140.2.1.1.1.1

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Segment boundaries for domain 1mhnA00

Chopping figure for domain 1mhnA00
DomainStart PDB ResidueStop PDB Residue
1mhnA00 89 147

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 2.30.30.140.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1khcA01 87.50 Protein complex localizationRegulation of gene expression by genetic imprintingDNA (cytosine-5)-methyltransferase 3BChromosome, centromeric regionProtein binding 2.30.30.160 65 16 83 2.03 2.44
1sf9A02 86.26 Bacillus subtilisUncharacterized protein yfhH 2.30.30.340 54 12 86 2.37 2.74
1mmdA01 84.45 ActomyosinMyosin II complexActin-myosin filament slidingProtein localizationActin filament binding 2.30.30.360 48 10 77 2.12 2.72
2hqxA01 84.22 Staphylococcal nuclease domain-containing protein 1NucleusGolgi apparatusTranscription cofactor activityHomo sapiens 2.30.30.140 81 25 70 2.29 3.25
1pfbA00 81.70 Specification of segmental identity, abdomenPRC1 complexMethylated histone residue bindingChromobox protein 8Nucleolus 2.40.50.40 55 12 71 3.54 4.97
1ib8A02 81.38 Hypothetical proteinRibosome maturation factor rimPStreptococcus pneumoniae 2.30.30.180 67 8 85 3.19 3.75
3f70B02 80.67 CytoplasmMethylated histone residue bindingLethal(3)malignant brain tumor-like protein 2Homo sapiens 2.30.30.160 88 5 64 2.48 3.83
1irxA02 79.98 Aminoacyl-tRNA biosynthesisLysyl-tRNA synthetase, class I [EC:6.1.1.6]Pyrococcus horikoshiiLysyl-tRNA synthetase 2.30.30.300 43 9 72 2.29 3.14
1oz2A02 78.89 SAM domain bindingRegulation of mitosisIdentical protein bindingChromatin modificationHemopoiesis 2.30.30.160 104 15 54 1.98 3.61
3f70A03 78.66 CytoplasmMethylated histone residue bindingLethal(3)malignant brain tumor-like protein 2Homo sapiens 2.30.30.160 101 13 54 2.48 4.55
2p0kA01 77.81 Sequence-specific DNA binding transcription factor activityPolycomb protein SCMH1Homo sapiensPolycomb protein SCMH1Anatomical structure morphogenesis 2.30.30.160 105 18 54 2.18 4.02
1n27A00 77.58 Mus musculusCytoplasmHepatoma-derived growth factor-related protein 3Nucleus 2.30.30.160 96 16 60 2.74 4.54
1oz2A03 77.38 Regulation of mitosisIdentical protein bindingSAM domain bindingChromatin modificationHemopoiesis 2.30.30.160 108 11 52 2.13 4.04
1oz2A01 77.18 Regulation of mitosisIdentical protein bindingSAM domain bindingMethylated histone residue bindingHemopoiesis 2.30.30.160 112 11 50 2.18 4.28
1tovA00 76.92 Caenorhabditis elegansTubulin-specific chaperone B 2.30.30.190 97 11 59 2.78 4.65
2f1lA02 76.15 Pseudomonas aeruginosaRibosome maturation factor rimM16S rRNA processing protein RimM 2.30.30.240 72 15 73 3.49 4.74
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mhnA00
LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mhnA00
LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:48

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"