CATH Domain: 1mg7A02 XML data for domain: 1mg7A02

Molscript image for 1mg7A02
1mg7A02
PDB coordinates for domain 1mg7A02

PDB 1mg7, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.230 Ribosomal Protein S5; domain 2
3.30.230.10 Gene3D
3.30.230.10.6
3.30.230.10.6.1
3.30.230.10.6.1.1
3.30.230.10.6.1.1.1
3.30.230.10.6.1.1.1.1

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Segment boundaries for domain 1mg7A02

Chopping figure for domain 1mg7A02
DomainStart PDB ResidueStop PDB Residue
1mg7A01 14 27
1mg7A01 203 348
1mg7A01 366 380
1mg7A02 28 194

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.30.230.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1kkhA01 81.21 Terpenoid backbone biosynthesisMethanocaldococcus jannaschiiMevalonate kinaseMevalonate kinase [EC:2.7.1.36]Metabolic pathways 3.30.230.10 181 8 79 3.85 4.87
1h72C01 81.09 Methanocaldococcus jannaschiiHomoserine kinase 3.30.230.10 161 10 86 3.82 4.39
2cz9A01 80.47 Amino sugar and nucleotide sugar metabolismGalactose metabolismProbable galactokinaseGalactokinase [EC:2.7.1.6]Pyrococcus horikoshii 3.30.230.10 174 8 80 3.47 4.31
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1mg7A02
SPVLTYMSKLAAAPHTVHMMDSGFLAINRQCLVKGKAILAREPKSSNEHMIDDLPKHAHDQHTLSILRDFIDQLKLHNVY
EINFYDPLDSSGKLAVIPMLIALWKCMLASETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSREEVHIIA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1mg7A02
SPVLTYMETEDDPNFRNSKLAAAPHTVHMMDSGFLAINRQCLVKGKAILAREPKSSNEHMIDDLPKHAHDQHTLSILRDF
IDQLKLHNVYEINFYDPLDSSGKLAVIPMLIALWKCMLASETDICDQEVLKSIMNSVIAKFELQIPCKNAVIDATLSGSR
EEVHIIA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"