Domain assigned by auto on 28 Apr 2006 18:10
Assigning to "3.50.50.60" based on similarity with "1gv4B01" (NWSI: 97.5757575757576, NWO: 95.3757225433526, SPS: 96.72, SPO: 100, RMSD: 0.73)
CATH Domain: 1m6iA01
1m6iA01
PDB 1m6i, Chain A, Domain 1
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.50
| 3-Layer(bba) Sandwich | |
 3.50.50
| FAD/NAD(P)-binding domain | |
 3.50.50.60
| Gene3D | |
 3.50.50.60.24
| ||
 3.50.50.60.24.1
| ||
 3.50.50.60.24.1.1
| ||
 3.50.50.60.24.1.1.1
| ||
 3.50.50.60.24.1.1.1.1
|
Segment boundaries for domain 1m6iA01
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1m6iA01 | 129 | 169 |
| 1m6iA01 | 212 | 261 |
| 1m6iA01 | 403 | 476 |
| 1m6iA02 | 172 | 204 |
| 1m6iA02 | 265 | 397 |
| 1m6iA03 | 481 | 608 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 3.50.50.60.24.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1nhpA01 | 87.56 | 3.50.50.60 | 167 | 16 | 91 | 3.05 | 3.33 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain ATOM Sequence
>pdb|1m6iA01 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQ ITYEKCLIATGNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG AAKPY
Domain History Events (5)
Flow stage update by auto on 28 Apr 2006 17:49
NW result present for Domain "1m6iA01"
Flow stage update by auto on 28 Apr 2006 17:43
All required files are present for Domain "1m6iA01"
Flow stage update by auto on 27 Apr 2006 17:30
Beginning processing for Domain "1m6iA01"
Insertion by auto on 05 Mar 2006 17:13
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
