CATH Domain: 1m41A00 XML data for domain: 1m41A00

Molscript image for 1m41A00
1m41A00
PDB coordinates for domain 1m41A00

PDB 1m41, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.30 FMN dependent fluorescent proteins Gene3D
3.20.20.30.7
3.20.20.30.7.1
3.20.20.30.7.1.1
3.20.20.30.7.1.1.1
3.20.20.30.7.1.1.1.1

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Segment boundaries for domain 1m41A00

Chopping figure for domain 1m41A00
DomainStart PDB ResidueStop PDB Residue
1m41A00 1 361

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.20.20.30.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tvlA00 82.44 Bacillus subtilisPutative monooxygenase moxC 3.20.20.30 390 21 79 3.42 4.32
2b81C00 80.32 Luciferase-like monooxygenaseLimonene and pinene degradationGamma-Hexachlorocyclohexane degradationNaphthalene and anthracene degradation[EC:1.14.-.-] 3.20.20.30 310 17 84 2.75 3.27
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1m41A00
SLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPS
VTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGAK
LLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAWQ
AAERLISHLLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIP
EIPQPQPL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1m41A00
SLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPS
VTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGAK
LLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAWQ
AAERLISHLLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIP
EIPQPQPL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:18

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"