CATH Domain: 1m3uA00 XML data for domain: 1m3uA00

Molscript image for 1m3uA00
1m3uA00
PDB coordinates for domain 1m3uA00

PDB 1m3u, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.60 Phosphoenolpyruvate-binding domains Gene3D
3.20.20.60.3
3.20.20.60.3.1
3.20.20.60.3.1.1
3.20.20.60.3.1.1.1
3.20.20.60.3.1.1.1.1

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Segment boundaries for domain 1m3uA00

Chopping figure for domain 1m3uA00
DomainStart PDB ResidueStop PDB Residue
1m3uA00 3 264

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.20.20.60.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xi3A00 77.24 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 15 67 3.32 4.91
2p10C01 77.22 Mesorhizobium lotiMll9387 protein 3.20.20.70 233 12 68 3.18 4.63
2qiwA01 77.05 Corynebacterium glutamicumPEP phosphonomutase and related enzymes 3.20.20.60 221 13 69 3.12 4.47
2w79A00 75.77 Histidine metabolismMetabolic pathwaysThermotoga maritima1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerasePhosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] 3.20.20.70 241 10 68 3.09 4.52
1m5wA00 75.75 Vitamin B6 metabolismMetabolic pathwaysPyridoxine 5-phosphate synthase [EC:2.6.99.2]Pyridoxine 5'-phosphate synthasePyridoxine biosynthetic process 3.20.20.70 242 5 69 3.27 4.73
1ub3A00 74.42 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 13 64 3.10 4.83
2fliC00 73.55 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 7 69 3.32 4.75
1x7fA01 73.05 Outer surface proteinBacillus cereus ATCC 14579 3.20.20.70 228 9 63 3.05 4.79
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1m3uA00
PTTISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLL
ADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQ
LLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDIRA
AVRQYMAEVESGVYPGEEHSFH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1m3uA00
MKPTTISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCL
LLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDI
RAAVRQYMAEVESGVYPGEEHSFH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:18

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"