CATH Domain: 1m3sB00 XML data for domain: 1m3sB00

Molscript image for 1m3sB00
1m3sB00
PDB coordinates for domain 1m3sB00

PDB 1m3s, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.10490 Glucose-6-phosphate isomerase like protein; domain 1 Gene3D
3.40.50.10490.13
3.40.50.10490.13.1
3.40.50.10490.13.1.1
3.40.50.10490.13.1.1.1
3.40.50.10490.13.1.1.1.1

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Segment boundaries for domain 1m3sB00

Chopping figure for domain 1m3sB00
DomainStart PDB ResidueStop PDB Residue
1m3sB00 0 185

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.10490.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1j5xA01 83.28 Thermotoga maritimaPutative uncharacterized protein 3.40.50.10490 155 14 81 3.74 4.57
1moqA02 81.24 Amino sugar and nucleotide sugar metabolismMetabolic pathwaysAlanine, aspartate and glutamate metabolismGlucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]UDP-N-acetylglucosamine biosynthetic process 3.40.50.10490 148 13 76 2.98 3.91
2q8nA02 76.27 Thermotoga maritimaAmino sugar and nucleotide sugar metabolismGlucose-6-phosphate isomeraseGlucose-6-phosphate isomerase [EC:5.3.1.9]Metabolic pathways 3.40.50.10490 162 13 72 3.61 4.99
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1m3sB00
GMKTTEYVAEILNELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEG
DLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFY
DAVILKLMEKKGLTMFTHHANLE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1m3sB00
GMKTTEYVAEILNELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEG
DLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFY
DAVILKLMEKKGLDSETMFTHHANLE
BLAST against CATH

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Domain History Events (4)

Flow stage update by cuff on 25 Apr 2006 18:50

COMMENT: Sarah - Scores are quite good FINAL: Lesley - Yes, merge. Very good scores. Chopping looks fine. Move 1940 into 10940.

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:45

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"